Mercurial > repos > brasset_jensen > srnapipe

comparison test-data/res_files/reads-sample-small.fastq-miRNAs-transcripts.html @ 61:9185ca0a7b43 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Updated package according to recommendations.
author pierre.pouchin
date Wed, 16 Jan 2019 08:18:13 -0500
parents
children
comparison
equal deleted inserted replaced
60:9645d995fb3c 61:9185ca0a7b43
1
2 <!DOCTYPE html>
3 <html lang="en">
4 <head>
5 <meta charset="utf-8">
6 <title>pipeline</title>
7 <meta name="viewport" content="width=device-width, initial-scale=1.0">
8 <meta name="description" content="">
9 <meta name="author" content="">
10 <!-- Le styles -->
11 <link href="css/bootstrap.css" rel="stylesheet">
12 <link href="css/bootstrap-table.css" rel="stylesheet">
13 <style type="text/css">
14 body {
15 padding-top: 60px;
16 padding-bottom: 40px;
17 }
18 div#page {
19 width: 940px;
20 background-color: #fff;
21 margin: 0 auto;
22 text-align: left;
23 border-color: #fff;
24 border-style: none solid solid;
25 border-width: medium 1px 1px;
26 }
27
28 div.content {
29 display: none;
30 float: right;
31 width: 550px;
32 }
33 div.content a, div.navigation a {
34 text-decoration: none;
35 color: #777;
36 }
37 div.content a:focus, div.content a:hover, div.content a:active {
38 text-decoration: underline;
39 }
40
41 div.controls {
42 margin-top: 5px;
43 height: 23px;
44 }
45
46 div.controls a {
47 padding: 5px;
48 }
49 div.ss-controls {
50 float: left;
51 }
52 div.nav-controls {
53 float: right;
54 }
55 div.slideshow-container {
56 position: relative;
57 clear: both;
58 height: 502px; /* This should be set to be at least the height of the largest image in the slideshow */
59 }
60 div.loader {
61 position: absolute;
62 top: 0;
63 left: 0;
64 background-image: url('loader.gif');
65 background-repeat: no-repeat;
66 background-position: center;
67 width: 550px;
68 height: 502px; /* This should be set to be at least the height of the largest image in the slideshow */
69 }
70 div.slideshow {
71
72 }
73
74 div.slideshow span.image-wrapper {
75 display: block;
76 position: absolute;
77 top: 0;
78 left: 0;
79 }
80 div.slideshow a.advance-link {
81 display: block;
82 width: 550px;
83 height: 502px; /* This should be set to be at least the height of the largest image in the slideshow */
84 line-height: 502px; /* This should be set to be at least the height of the largest image in the slideshow */
85 text-align: center;
86 }
87 div.slideshow a.advance-link:hover, div.slideshow a.advance-link:active, div.slideshow a.advance-link:visited {
88 text-decoration: none;
89 }
90 div.slideshow img {
91 vertical-align: middle;
92 border: 1px solid #ccc;
93 }
94
95 div.image-title {
96 font-weight: bold;
97 font-size: 1.4em;
98 }
99
100 div.image-desc {
101 line-height: 1.3em;
102 padding-top: 12px;
103 }
104 div.navigation {
105
106 }
107 ul.thumbs {
108 clear: both;
109 margin: 0;
110 padding: 0;
111 }
112 ul.thumbs li {
113 float: none;
114 padding: 0;
115 margin: 0;
116 list-style: none;
117 }
118 a.thumb {
119 padding: 0;
120 display: inline;
121 border: none;
122 }
123 ul.thumbs li.selected a.thumb {
124 color: #000;
125 font-weight: bold;
126 }
127 a.thumb:focus {
128 outline: none;
129 }
130 ul.thumbs img {
131 border: none;
132 display: block;
133 }
134 div.pagination {
135 clear: both;
136 }
137 div.navigation div.top {
138 margin-bottom: 12px;
139 height: 11px;
140 }
141 div.navigation div.bottom {
142 margin-top: 12px;
143 }
144 div.pagination a, div.pagination span.current, div.pagination span.ellipsis {
145 display: block;
146 float: left;
147 margin-right: 2px;
148 padding: 4px 7px 2px 7px;
149 border: 1px solid #ccc;
150 }
151 div.pagination a:hover {
152 background-color: #eee;
153 text-decoration: none;
154 }
155 div.pagination span.current {
156 font-weight: bold;
157 background-color: #000;
158 border-color: #000;
159 color: #fff;
160 }
161 div.pagination span.ellipsis {
162 border: none;
163 padding: 5px 0 3px 2px;
164 }
165
166 div.download {
167 float: right;
168 }
169
170 div.caption-container {
171 position: relative;
172 clear: left;
173 height: 75px;
174 }
175 span.image-caption {
176 display: block;
177 position: absolute;
178 width: 550px;
179 top: 0;
180 left: 0;
181 }
182 div.caption {
183 padding: 12px;
184 }
185
186 /* Featurettes
187 ------------------------- */
188
189 .featurette {
190 padding-top: 20px; /* Vertically center images part 1: add padding above and below text. */
191 overflow: hidden; /* Vertically center images part 2: clear their floats. */
192 text-align: center;
193 }
194
195 .featurette-p
196 {
197 text-align: left;
198 }
199
200 .featurette-image {
201 margin-top: 10px; /* Vertically center images part 3: negative margin up the image the same amount of the padding to center it. */
202 width: 450px;
203 height: auto;
204 }
205
206 </style>
207 <link href="css/bootstrap-responsive.css" rel="stylesheet">
208 </head>
209 <body>
210
211 <div class="navbar navbar-inverse navbar-fixed-top">
212 <div class="navbar-inner">
213 <div class="container">
214 <button type="button" class="btn btn-navbar" data-toggle="collapse" data-target=".nav-collapse">
215 <span class="icon-bar"></span>
216 <span class="icon-bar"></span>
217 <span class="icon-bar"></span>
218 </button>
219 <a class="brand" href="report.txt">Report</a>
220 <div class="nav-collapse collapse">
221 <ul class="nav">
222 <li class="active"><a href="reads-sample-small.fastq.html">reads-sample-small.fastq</a></li>
223 </ul>
224 </div><!--/.nav-collapse -->
225 </div>
226 </div>
227 </div>
228 <div class="container">
229 <div class="featurette">
230 <h1>transcripts</h1>
231 <p class="featurette-p">
232 <A HREF="reads-sample-small.fastq/subgroups/miRNAs//miRNAs-transcripts_reads_counts.txt">read number per transcript (txt)</A><br/>
233 <A HREF="reads-sample-small.fastq/subgroups/miRNAs//miRNAs-transcripts_sorted.bam">transcripts mappers (sorted bam)</A><br/>
234 <A HREF="reads-sample-small.fastq/subgroups/miRNAs//miRNAs-transcripts_unique_sorted.bam">transcripts unique mappers (sorted bam)</A><br/>
235
236 </p>
237 </div>
238 </div>
239
240 <!-- FOOTER -->
241 <div class="container">
242 <footer>
243
244 </footer>
245 </div>
246 <!-- Le javascript
247 ================================================== -->
248 <!-- Placed at the end of the document so the pages load faster -->
249 <script type="text/javascript" src="js/filter.js"></script>
250 <script type="text/javascript" src="js/jquery.js"></script>
251 <script type="text/javascript" src="js/jquery-1.3.2.js"></script>
252 <script type="text/javascript" src="js/jquery.galleriffic.js"></script>
253 <script type="text/javascript" src="js/jquery.opacityrollover.js"></script>
254 <script type="text/javascript" src="js/bootstrap-table.js"></script>
255 <script type="text/javascript" src="js/bootstrap.min.js"></script>
256 <script type="text/javascript">
257 jQuery(document).ready(function($) {
258 // We only want these styles applied when javascript is enabled
259 $('div.navigation').css({'width' : '300px', 'float' : 'left'});
260 $('div.content').css('display', 'block');
261
262 $(".each-gallery").each(function(i){
263 // Initially set opacity on thumbs and add
264 // additional styling for hover effect on thumbs
265 var onMouseOutOpacity = 0.67;
266 $('#thumbs + i + ul.thumbs li').opacityrollover({
267 mouseOutOpacity: onMouseOutOpacity,
268 mouseOverOpacity: 1.0,
269 fadeSpeed: 'fast',
270 exemptionSelector: '.selected'
271 });
272
273 // Initialize Advanced Galleriffic Gallery
274 var gallery = $('#thumbs'+i).galleriffic({
275 delay: 2500,
276 numThumbs: 22,
277 preloadAhead: 10,
278 enableTopPager: true,
279 enableBottomPager: true,
280 maxPagesToShow: 7,
281 imageContainerSel: '#slideshow'+ i,
282 controlsContainerSel: '#controls' + i,
283 captionContainerSel: '#caption' + i,
284 loadingContainerSel: '#loading' + i,
285 renderSSControls: true,
286 renderNavControls: true,
287 playLinkText: 'Play',
288 pauseLinkText: 'Pause',
289 prevLinkText: '&lsaquo; Previous',
290 nextLinkText: 'Next &rsaquo;',
291 nextPageLinkText: 'Next &rsaquo;',
292 prevPageLinkText: '&lsaquo; Prev',
293 enableHistory: false,
294 autoStart: false,
295 syncTransitions: true,
296 defaultTransitionDuration: 900,
297 onSlideChange: function(prevIndex, nextIndex) {
298 // 'this' refers to the gallery, which is an extension of $('#thumbs')
299 this.find('ul.thumbs').children()
300 .eq(prevIndex).fadeTo('fast', onMouseOutOpacity).end()
301 .eq(nextIndex).fadeTo('fast', 1.0);
302 },
303 onPageTransitionOut: function(callback) {
304 this.fadeTo('fast', 0.0, callback);
305 },
306 onPageTransitionIn: function() {
307 this.fadeTo('fast', 1.0);
308 }
309 });
310 });
311 });
312 </script>
313 </body>
314 </html>
315