comparison test-data/res_files/reads-sample-small.fastq-piRNAs-TEs.html @ 61:9185ca0a7b43 draft

Updated package according to recommendations.
author pierre.pouchin
date Wed, 16 Jan 2019 08:18:13 -0500
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60:9645d995fb3c 61:9185ca0a7b43
1
2 <!DOCTYPE html>
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6 <title>pipeline</title>
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205
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207 <link href="css/bootstrap-responsive.css" rel="stylesheet">
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209 <body>
210
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216 <span class="icon-bar"></span>
217 <span class="icon-bar"></span>
218 </button>
219 <a class="brand" href="report.txt">Report</a>
220 <div class="nav-collapse collapse">
221 <ul class="nav">
222 <li class="active"><a href="reads-sample-small.fastq.html">reads-sample-small.fastq</a></li>
223 </ul>
224 </div><!--/.nav-collapse -->
225 </div>
226 </div>
227 </div> <div class="container"> <p><a class="btn" href="reads-sample-small.fastq-piRNAs-PPP.html">Ping Pong Partners</a></p>
228 </div>
229 <div class="container">
230 <div class="featurette">
231 <h1>Transposable elements</h1>
232 <p class="featurette-p">
233 <A HREF="reads-sample-small.fastq/subgroups/piRNAs//piRNAs-TEs_minus.bedgraph">bedgraph minus strand</A><br/>
234 <A HREF="reads-sample-small.fastq/subgroups/piRNAs//piRNAs-TEs_plus.bedgraph">bedgraph plus strand</A><br/>
235 <A HREF="reads-sample-small.fastq/subgroups/piRNAs//piRNAs-TEs_reads_counts.txt">read number per TE 0 to 3 mismatches (txt)</A><br/>
236 <A HREF="reads-sample-small.fastq/subgroups/piRNAs//piRNAs-TEs_reads_counts_mismatches.txt">read number per TE with 1 to 3 mismatches (txt)</A><br/>
237 <A HREF="reads-sample-small.fastq/subgroups/piRNAs//piRNAs-TEs_reads_counts_nomismatches.txt">read number per TE with no mismatch (txt)</A><br/>
238 <A HREF="reads-sample-small.fastq/subgroups/piRNAs//piRNAs-TEs_sorted.bam">TEs mappers (sorted bam)</A><br/>
239 <A HREF="reads-sample-small.fastq/subgroups/piRNAs//piRNAs-TEs_unique_sorted.bam">TEs unique mappers (sorted bam)</A><br/>
240
241 </p>
242 </div>
243 </div>
244
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247 <div class="each-gallery">
248 <div id="gallery" class="content">
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250 <div class="slideshow-container">
251 <div id="loading0" class="loader"></div>
252 <div id="slideshow0" class="slideshow"></div>
253 </div>
254 <div id="caption0" class="caption-container">Reads randomly assigned</div>
255 </div>
256 <div id="thumbs0" class="navigation">
257 <input type="text" id="myInput0" onkeyup="search(this)" placeholder="Search for names...">
258 <ul class="thumbs noscript">
259
260 <li>
261 <a class="thumb" href="reads-sample-small.fastq/subgroups/piRNAs//Gviz_TEs/BATUMI_I.png" title="BATUMI_I">BATUMI_I</a>
262 </li>
263
264 <li>
265 <a class="thumb" href="reads-sample-small.fastq/subgroups/piRNAs//Gviz_TEs/BATUMI_LTR.png" title="BATUMI_LTR">BATUMI_LTR</a>
266 </li>
267
268 <li>
269 <a class="thumb" href="reads-sample-small.fastq/subgroups/piRNAs//Gviz_TEs/BS2.png" title="BS2">BS2</a>
270 </li>
271
272 <li>
273 <a class="thumb" href="reads-sample-small.fastq/subgroups/piRNAs//Gviz_TEs/DMCR1A.png" title="DMCR1A">DMCR1A</a>
274 </li>
275
276 <li>
277 <a class="thumb" href="reads-sample-small.fastq/subgroups/piRNAs//Gviz_TEs/DMRT1B.png" title="DMRT1B">DMRT1B</a>
278 </li>
279
280 <li>
281 <a class="thumb" href="reads-sample-small.fastq/subgroups/piRNAs//Gviz_TEs/FW.png" title="FW">FW</a>
282 </li>
283
284 <li>
285 <a class="thumb" href="reads-sample-small.fastq/subgroups/piRNAs//Gviz_TEs/G6_DM.png" title="G6_DM">G6_DM</a>
286 </li>
287
288 <li>
289 <a class="thumb" href="reads-sample-small.fastq/subgroups/piRNAs//Gviz_TEs/Gypsy2-LTR_DM.png" title="Gypsy2-LTR_DM">Gypsy2-LTR_DM</a>
290 </li>
291
292 <li>
293 <a class="thumb" href="reads-sample-small.fastq/subgroups/piRNAs//Gviz_TEs/I_DM.png" title="I_DM">I_DM</a>
294 </li>
295
296 <li>
297 <a class="thumb" href="reads-sample-small.fastq/subgroups/piRNAs//Gviz_TEs/MAX_I.png" title="MAX_I">MAX_I</a>
298 </li>
299
300 <li>
301 <a class="thumb" href="reads-sample-small.fastq/subgroups/piRNAs//Gviz_TEs/MAX_LTR.png" title="MAX_LTR">MAX_LTR</a>
302 </li>
303
304 <li>
305 <a class="thumb" href="reads-sample-small.fastq/subgroups/piRNAs//Gviz_TEs/PROTOP.png" title="PROTOP">PROTOP</a>
306 </li>
307
308 </ul>
309 </div>
310 <div style="clear: both;"></div></div>
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