Mercurial > repos > brasset_jensen > srnapipe
diff test-data/res_files/reads-sample-small.fastq/subgroups/PPPartners/DMCR1A/antisens.txt @ 63:11708af40030 draft
planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit a461e07471d3897046e14389171a2c03d09b912d
author | pierre.pouchin |
---|---|
date | Thu, 24 Jan 2019 13:09:46 -0500 |
parents | 9185ca0a7b43 |
children |
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--- a/test-data/res_files/reads-sample-small.fastq/subgroups/PPPartners/DMCR1A/antisens.txt Thu Jan 17 09:56:52 2019 -0500 +++ b/test-data/res_files/reads-sample-small.fastq/subgroups/PPPartners/DMCR1A/antisens.txt Thu Jan 24 13:09:46 2019 -0500 @@ -1,230 +1,62 @@ >6|16|DMCR1A|1 AAAAACACGACCGTTCGCTTTGAAA ->65|16|DMCR1A|1 -AAGATTATTAAAAACCACTGCTG ->341|16|DMCR1A|1 -ACCGCACGAGAGCAGTCTGCACGCT ->341|16|DMCR1A|1 -AACCGCACGAGAGCAGTCTGCACGCT ->541|16|DMCR1A|1 -TTCGGCCATTAAAACCAGCGCACT ->546|16|DMCR1A|1 -TCACTCGTTCGGCCATTAAAACCAGC ->550|16|DMCR1A|1 -TCATCACTCGTTCGGCCATTAAAAC ->558|16|DMCR1A|2 -TGCTAGGTCATCACTCGTTCGGCC ->662|16|DMCR1A|1 -GTTGATCAGTTCTTTCAAGCCACCT ->703|16|DMCR1A|2 -TCATCGGCTCGACGGAAACAATCTC ->705|16|DMCR1A|2 -TATCATCGGCTCGACGGAAACAATC ->733|16|DMCR1A|2 -TAAACTGTGAATTAAGCGCGCACA ->734|16|DMCR1A|2 -TTAAACTGTGAATTAAGCGCGCAC ->774|16|DMCR1A|1 -TTTTTTGATCTTTGGAGATTTATC ->861|16|DMCR1A|1 -TTGCTGCGATTGACAGCTGATCAGT ->867|16|DMCR1A|1 -TGCGGATTTGCTGCGATTGACAGCTG ->868|16|DMCR1A|1 -TGCGGATTTGCTGCGATTGACAGCT ->869|16|DMCR1A|1 -TGCGGATTTGCTGCGATTGACAGC ->869|16|DMCR1A|4 -TATGCGGATTTGCTGCGATTGACAGC ->870|16|DMCR1A|2 -TGCGGATTTGCTGCGATTGACAG ->870|16|DMCR1A|1 -TATGCGGATTTGCTGCGATTGACAG ->928|16|DMCR1A|1 -TCACAGCGAATTGATCGGATTGCT ->1024|16|DMCR1A|2 -CCTTGTGGTTGTAAACTATTCGGGA >1025|16|DMCR1A|1 CCTTGTGGTTGTAAACTATTCGGG ->1026|16|DMCR1A|1 -TCCCTTGTGGTTGTAAACTATTCGG ->1056|16|DMCR1A|1 -TGCCCACTTGTGCCGGTAGACCGGACTC ->1057|16|DMCR1A|1 -CACTTGTGCCGGTAGACCGGACT ->1058|16|DMCR1A|1 -TGCCCACTTGTGCCGGTAGACCGGAC ->1058|16|DMCR1A|1 -AGTGCCCACTTGTGCCGGTAGACCGGAC ->1150|16|DMCR1A|2 +>1150|16|DMCR1A|1 TTTGATCAGGGGAAAGCCGAGAAA ->1151|16|DMCR1A|1 -TGTTTGATCAGGGGAAAGCCGAGAA ->1152|16|DMCR1A|1 -TGTTTGATCAGGGGAAAGCCGAGA ->1175|16|DMCR1A|2 -TATATAATACAATACATCAGACGAT ->1200|16|DMCR1A|1 -TATTATCGGCTTTTGTTTTGTCTTG ->1202|16|DMCR1A|10 +>1202|16|DMCR1A|1 TATTATCGGCTTTTGTTTTGTCT ->1210|16|DMCR1A|2 +>1210|16|DMCR1A|1 TTCCACTTTTATATTATCGGCTTTTG ->1214|16|DMCR1A|3 -TTTTCCACTTTTATATTATCGGCT >1214|16|DMCR1A|1 -TTTTTCCACTTTTATATTATCGGCT ->1343|16|DMCR1A|1 -TCTTAGCTTCGAACTCTTTTACC ->1347|16|DMCR1A|1 -TTTGATCTTAGCTTCGAACTCTTT ->1348|16|DMCR1A|1 -TTTGATCTTAGCTTCGAACTCTT +TTTTCCACTTTTATATTATCGGCT >1348|16|DMCR1A|1 TTTTTGATCTTAGCTTCGAACTCTT ->1351|16|DMCR1A|2 -TATTTTTGATCTTAGCTTCGAACT ->1411|16|DMCR1A|2 -CGGATGGTGCAGTGGTCTGGCCAC >1413|16|DMCR1A|1 GCGGATGGTGCAGTGGTCTGGCC ->1414|16|DMCR1A|3 +>1414|16|DMCR1A|1 GGCGGATGGTGCAGTGGTCTGGC >1416|16|DMCR1A|1 GAGGCGGATGGTGCAGTGGTCTG ->1425|16|DMCR1A|2 +>1425|16|DMCR1A|1 GAAGATGAAGAGGCGGATGGTGC ->1538|16|DMCR1A|5 -TTATATGGGATGCAAATGAAAGACT ->1539|16|DMCR1A|1 -TTATATGGGATGCAAATGAAAGAC ->1555|16|DMCR1A|1 -TCGCTGTGAACACTATTATATGG ->1576|16|DMCR1A|3 -TAAGTATCTCCGGCTTTAACCAAGTC ->1578|16|DMCR1A|7 +>1578|16|DMCR1A|1 TAAGTATCTCCGGCTTTAACCAAG ->1592|16|DMCR1A|1 -GAAGACTTCGGAGTTAAGTATCTC +>1602|16|DMCR1A|1 +TACATACCTGGGAAGACTTCGGAGT +>1603|16|DMCR1A|2 +TACATACCTGGGAAGACTTCGGAG >1681|16|DMCR1A|1 TCCTCCGGCGCGAGGGTAGATCTAACC ->1753|16|DMCR1A|1 -TAAACTGAACTGTCGGAAAAAGACAGC ->1755|16|DMCR1A|1 -TAAACTGAACTGTCGGAAAAAGACA ->1756|16|DMCR1A|2 -TATAAACTGAACTGTCGGAAAAAGAC ->1757|16|DMCR1A|3 +>1757|16|DMCR1A|1 TATAAACTGAACTGTCGGAAAAAGA ->1770|16|DMCR1A|1 -TACGAGAACGTAATATAAACTGAAC >1773|16|DMCR1A|1 TATACGAGAACGTAATATAAACTG ->1783|16|DMCR1A|1 -GATGGCGGAATATACGAGAACGTA ->1800|16|DMCR1A|2 -TATTCTGGGAATTCCGAAGATGGCG ->1802|16|DMCR1A|1 -TATTCTGGGAATTCCGAAGATGG ->1805|16|DMCR1A|1 -TCTGATATTCTGGGAATTCCGAAGA ->1807|16|DMCR1A|1 -TTCTGATATTCTGGGAATTCCGAA ->1813|16|DMCR1A|5 +>1813|16|DMCR1A|1 GATGATTCTGATATTCTGGGAAT ->1820|16|DMCR1A|2 -TAGAGGACAGATGATTCTGATATTC ->1838|16|DMCR1A|1 -TATTCAAGGTGGACTGGATAGAGGA ->1863|16|DMCR1A|3 +>1863|16|DMCR1A|2 TACCAATTGGTCCCTGTCAGACAGTT ->1864|16|DMCR1A|1 -TACCAATTGGTCCCTGTCAGACAGT ->1864|16|DMCR1A|1 -CTACCAATTGGTCCCTGTCAGACAGT ->1865|16|DMCR1A|2 -TACCAATTGGTCCCTGTCAGACAG ->1865|16|DMCR1A|1 -CTACCAATTGGTCCCTGTCAGACAG ->1865|16|DMCR1A|2 -ACTACCAATTGGTCCCTGTCAGACAG ->1872|16|DMCR1A|6 +>1872|16|DMCR1A|1 CCTAGAACTACCAATTGGTCCCTGT >1873|16|DMCR1A|1 TCACCTAGAACTACCAATTGGTCCCTG >1874|16|DMCR1A|1 -CCTAGAACTACCAATTGGTCCCT ->1874|16|DMCR1A|6 TCACCTAGAACTACCAATTGGTCCCT ->1875|16|DMCR1A|1 -CACCTAGAACTACCAATTGGTCCC ->1875|16|DMCR1A|16 +>1875|16|DMCR1A|2 TCACCTAGAACTACCAATTGGTCCC ->1876|16|DMCR1A|1 -TCACCTAGAACTACCAATTGGTCC ->1879|16|DMCR1A|3 +>1879|16|DMCR1A|2 TAAAATCACCTAGAACTACCAATTGG ->1882|16|DMCR1A|1 -TAAAATCACCTAGAACTACCAAT ->1883|16|DMCR1A|1 -TTAAAATCACCTAGAACTACCAA ->1884|16|DMCR1A|1 -TATATTAAAATCACCTAGAACTACCA ->1895|16|DMCR1A|2 -TTGTGCCAGGTATATTAAAATCACC ->1925|16|DMCR1A|1 -TATATTCGATTGTTTTTCTGGGGA ->1971|16|DMCR1A|1 -TAAGTCGAGCAAGCCGTCAATAAAGT ->1981|16|DMCR1A|1 -ACAACGATAAGTCGAGCAAGCCG ->1988|16|DMCR1A|1 -TTAACTTGCGACAACGATAAGTCGAG ->2100|16|DMCR1A|1 -TGATATGGATATTCAGGTTGAGTTC ->2126|16|DMCR1A|1 -TATGTCGATTGCCACCTCGAAAGTAGG ->2130|16|DMCR1A|1 -CCTATGTCGATTGCCACCTCGAAAG ->2131|16|DMCR1A|1 -TACCTATGTCGATTGCCACCTCGAAA ->2132|16|DMCR1A|1 -TACCTATGTCGATTGCCACCTCGAA ->2133|16|DMCR1A|1 -TACCTATGTCGATTGCCACCTCGA ->2153|16|DMCR1A|2 +>2153|16|DMCR1A|1 TCTGAATTTACTTTTAATACCGTACC ->2160|16|DMCR1A|1 -ACTTCTCTGAATTTACTTTTAATA ->2161|16|DMCR1A|1 -TGACTTCTCTGAATTTACTTTTAAT ->2211|16|DMCR1A|2 -TGTTTAGCCTCCGAAAATTTGCCT ->2211|16|DMCR1A|3 +>2211|16|DMCR1A|1 TTGTTTAGCCTCCGAAAATTTGCCT ->2335|16|DMCR1A|1 -TTGACGGATAGTACATCGGAACACAA ->2343|16|DMCR1A|1 -TTTCGAGATTGACGGATAGTACATCG ->2346|16|DMCR1A|1 -TTTCGAGATTGACGGATAGTACA ->2350|16|DMCR1A|1 -GAGGTTTCGAGATTGACGGATAG ->2350|16|DMCR1A|1 -GGAGGTTTCGAGATTGACGGATAG >2386|16|DMCR1A|1 TACATTTCTTAGGTGTGTCAACTCT ->2413|16|DMCR1A|1 -TTTTTAAATTTTATATAGAGTCTGGAC ->2436|16|DMCR1A|1 -GGATGGACTGAGAACCGGTATTTT ->2437|16|DMCR1A|1 -GGATGGACTGAGAACCGGTATTT ->2442|16|DMCR1A|5 +>2430|16|DMCR1A|1 +TGGACTGAGAACCGGTATTTTTAAATT +>2432|16|DMCR1A|3 +TGGACTGAGAACCGGTATTTTTAAA +>2433|16|DMCR1A|2 +TGGACTGAGAACCGGTATTTTTAA +>2442|16|DMCR1A|1 TTACAAAGGATGGACTGAGAACCGG ->2444|16|DMCR1A|5 -TTACAAAGGATGGACTGAGAACC ->2446|16|DMCR1A|6 -TATTTACAAAGGATGGACTGAGAA ->2447|16|DMCR1A|2 -TATTTACAAAGGATGGACTGAGA