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diff test-data/res_files/reads-sample-small.fastq/subgroups/PPPartners/DMCR1A/antisens.txt @ 61:9185ca0a7b43 draft

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Updated package according to recommendations.
author pierre.pouchin
date Wed, 16 Jan 2019 08:18:13 -0500
parents
children 11708af40030
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/res_files/reads-sample-small.fastq/subgroups/PPPartners/DMCR1A/antisens.txt	Wed Jan 16 08:18:13 2019 -0500
@@ -0,0 +1,230 @@
+>6|16|DMCR1A|1
+AAAAACACGACCGTTCGCTTTGAAA
+>65|16|DMCR1A|1
+AAGATTATTAAAAACCACTGCTG
+>341|16|DMCR1A|1
+ACCGCACGAGAGCAGTCTGCACGCT
+>341|16|DMCR1A|1
+AACCGCACGAGAGCAGTCTGCACGCT
+>541|16|DMCR1A|1
+TTCGGCCATTAAAACCAGCGCACT
+>546|16|DMCR1A|1
+TCACTCGTTCGGCCATTAAAACCAGC
+>550|16|DMCR1A|1
+TCATCACTCGTTCGGCCATTAAAAC
+>558|16|DMCR1A|2
+TGCTAGGTCATCACTCGTTCGGCC
+>662|16|DMCR1A|1
+GTTGATCAGTTCTTTCAAGCCACCT
+>703|16|DMCR1A|2
+TCATCGGCTCGACGGAAACAATCTC
+>705|16|DMCR1A|2
+TATCATCGGCTCGACGGAAACAATC
+>733|16|DMCR1A|2
+TAAACTGTGAATTAAGCGCGCACA
+>734|16|DMCR1A|2
+TTAAACTGTGAATTAAGCGCGCAC
+>774|16|DMCR1A|1
+TTTTTTGATCTTTGGAGATTTATC
+>861|16|DMCR1A|1
+TTGCTGCGATTGACAGCTGATCAGT
+>867|16|DMCR1A|1
+TGCGGATTTGCTGCGATTGACAGCTG
+>868|16|DMCR1A|1
+TGCGGATTTGCTGCGATTGACAGCT
+>869|16|DMCR1A|1
+TGCGGATTTGCTGCGATTGACAGC
+>869|16|DMCR1A|4
+TATGCGGATTTGCTGCGATTGACAGC
+>870|16|DMCR1A|2
+TGCGGATTTGCTGCGATTGACAG
+>870|16|DMCR1A|1
+TATGCGGATTTGCTGCGATTGACAG
+>928|16|DMCR1A|1
+TCACAGCGAATTGATCGGATTGCT
+>1024|16|DMCR1A|2
+CCTTGTGGTTGTAAACTATTCGGGA
+>1025|16|DMCR1A|1
+CCTTGTGGTTGTAAACTATTCGGG
+>1026|16|DMCR1A|1
+TCCCTTGTGGTTGTAAACTATTCGG
+>1056|16|DMCR1A|1
+TGCCCACTTGTGCCGGTAGACCGGACTC
+>1057|16|DMCR1A|1
+CACTTGTGCCGGTAGACCGGACT
+>1058|16|DMCR1A|1
+TGCCCACTTGTGCCGGTAGACCGGAC
+>1058|16|DMCR1A|1
+AGTGCCCACTTGTGCCGGTAGACCGGAC
+>1150|16|DMCR1A|2
+TTTGATCAGGGGAAAGCCGAGAAA
+>1151|16|DMCR1A|1
+TGTTTGATCAGGGGAAAGCCGAGAA
+>1152|16|DMCR1A|1
+TGTTTGATCAGGGGAAAGCCGAGA
+>1175|16|DMCR1A|2
+TATATAATACAATACATCAGACGAT
+>1200|16|DMCR1A|1
+TATTATCGGCTTTTGTTTTGTCTTG
+>1202|16|DMCR1A|10
+TATTATCGGCTTTTGTTTTGTCT
+>1210|16|DMCR1A|2
+TTCCACTTTTATATTATCGGCTTTTG
+>1214|16|DMCR1A|3
+TTTTCCACTTTTATATTATCGGCT
+>1214|16|DMCR1A|1
+TTTTTCCACTTTTATATTATCGGCT
+>1343|16|DMCR1A|1
+TCTTAGCTTCGAACTCTTTTACC
+>1347|16|DMCR1A|1
+TTTGATCTTAGCTTCGAACTCTTT
+>1348|16|DMCR1A|1
+TTTGATCTTAGCTTCGAACTCTT
+>1348|16|DMCR1A|1
+TTTTTGATCTTAGCTTCGAACTCTT
+>1351|16|DMCR1A|2
+TATTTTTGATCTTAGCTTCGAACT
+>1411|16|DMCR1A|2
+CGGATGGTGCAGTGGTCTGGCCAC
+>1413|16|DMCR1A|1
+GCGGATGGTGCAGTGGTCTGGCC
+>1414|16|DMCR1A|3
+GGCGGATGGTGCAGTGGTCTGGC
+>1416|16|DMCR1A|1
+GAGGCGGATGGTGCAGTGGTCTG
+>1425|16|DMCR1A|2
+GAAGATGAAGAGGCGGATGGTGC
+>1538|16|DMCR1A|5
+TTATATGGGATGCAAATGAAAGACT
+>1539|16|DMCR1A|1
+TTATATGGGATGCAAATGAAAGAC
+>1555|16|DMCR1A|1
+TCGCTGTGAACACTATTATATGG
+>1576|16|DMCR1A|3
+TAAGTATCTCCGGCTTTAACCAAGTC
+>1578|16|DMCR1A|7
+TAAGTATCTCCGGCTTTAACCAAG
+>1592|16|DMCR1A|1
+GAAGACTTCGGAGTTAAGTATCTC
+>1681|16|DMCR1A|1
+TCCTCCGGCGCGAGGGTAGATCTAACC
+>1753|16|DMCR1A|1
+TAAACTGAACTGTCGGAAAAAGACAGC
+>1755|16|DMCR1A|1
+TAAACTGAACTGTCGGAAAAAGACA
+>1756|16|DMCR1A|2
+TATAAACTGAACTGTCGGAAAAAGAC
+>1757|16|DMCR1A|3
+TATAAACTGAACTGTCGGAAAAAGA
+>1770|16|DMCR1A|1
+TACGAGAACGTAATATAAACTGAAC
+>1773|16|DMCR1A|1
+TATACGAGAACGTAATATAAACTG
+>1783|16|DMCR1A|1
+GATGGCGGAATATACGAGAACGTA
+>1800|16|DMCR1A|2
+TATTCTGGGAATTCCGAAGATGGCG
+>1802|16|DMCR1A|1
+TATTCTGGGAATTCCGAAGATGG
+>1805|16|DMCR1A|1
+TCTGATATTCTGGGAATTCCGAAGA
+>1807|16|DMCR1A|1
+TTCTGATATTCTGGGAATTCCGAA
+>1813|16|DMCR1A|5
+GATGATTCTGATATTCTGGGAAT
+>1820|16|DMCR1A|2
+TAGAGGACAGATGATTCTGATATTC
+>1838|16|DMCR1A|1
+TATTCAAGGTGGACTGGATAGAGGA
+>1863|16|DMCR1A|3
+TACCAATTGGTCCCTGTCAGACAGTT
+>1864|16|DMCR1A|1
+TACCAATTGGTCCCTGTCAGACAGT
+>1864|16|DMCR1A|1
+CTACCAATTGGTCCCTGTCAGACAGT
+>1865|16|DMCR1A|2
+TACCAATTGGTCCCTGTCAGACAG
+>1865|16|DMCR1A|1
+CTACCAATTGGTCCCTGTCAGACAG
+>1865|16|DMCR1A|2
+ACTACCAATTGGTCCCTGTCAGACAG
+>1872|16|DMCR1A|6
+CCTAGAACTACCAATTGGTCCCTGT
+>1873|16|DMCR1A|1
+TCACCTAGAACTACCAATTGGTCCCTG
+>1874|16|DMCR1A|1
+CCTAGAACTACCAATTGGTCCCT
+>1874|16|DMCR1A|6
+TCACCTAGAACTACCAATTGGTCCCT
+>1875|16|DMCR1A|1
+CACCTAGAACTACCAATTGGTCCC
+>1875|16|DMCR1A|16
+TCACCTAGAACTACCAATTGGTCCC
+>1876|16|DMCR1A|1
+TCACCTAGAACTACCAATTGGTCC
+>1879|16|DMCR1A|3
+TAAAATCACCTAGAACTACCAATTGG
+>1882|16|DMCR1A|1
+TAAAATCACCTAGAACTACCAAT
+>1883|16|DMCR1A|1
+TTAAAATCACCTAGAACTACCAA
+>1884|16|DMCR1A|1
+TATATTAAAATCACCTAGAACTACCA
+>1895|16|DMCR1A|2
+TTGTGCCAGGTATATTAAAATCACC
+>1925|16|DMCR1A|1
+TATATTCGATTGTTTTTCTGGGGA
+>1971|16|DMCR1A|1
+TAAGTCGAGCAAGCCGTCAATAAAGT
+>1981|16|DMCR1A|1
+ACAACGATAAGTCGAGCAAGCCG
+>1988|16|DMCR1A|1
+TTAACTTGCGACAACGATAAGTCGAG
+>2100|16|DMCR1A|1
+TGATATGGATATTCAGGTTGAGTTC
+>2126|16|DMCR1A|1
+TATGTCGATTGCCACCTCGAAAGTAGG
+>2130|16|DMCR1A|1
+CCTATGTCGATTGCCACCTCGAAAG
+>2131|16|DMCR1A|1
+TACCTATGTCGATTGCCACCTCGAAA
+>2132|16|DMCR1A|1
+TACCTATGTCGATTGCCACCTCGAA
+>2133|16|DMCR1A|1
+TACCTATGTCGATTGCCACCTCGA
+>2153|16|DMCR1A|2
+TCTGAATTTACTTTTAATACCGTACC
+>2160|16|DMCR1A|1
+ACTTCTCTGAATTTACTTTTAATA
+>2161|16|DMCR1A|1
+TGACTTCTCTGAATTTACTTTTAAT
+>2211|16|DMCR1A|2
+TGTTTAGCCTCCGAAAATTTGCCT
+>2211|16|DMCR1A|3
+TTGTTTAGCCTCCGAAAATTTGCCT
+>2335|16|DMCR1A|1
+TTGACGGATAGTACATCGGAACACAA
+>2343|16|DMCR1A|1
+TTTCGAGATTGACGGATAGTACATCG
+>2346|16|DMCR1A|1
+TTTCGAGATTGACGGATAGTACA
+>2350|16|DMCR1A|1
+GAGGTTTCGAGATTGACGGATAG
+>2350|16|DMCR1A|1
+GGAGGTTTCGAGATTGACGGATAG
+>2386|16|DMCR1A|1
+TACATTTCTTAGGTGTGTCAACTCT
+>2413|16|DMCR1A|1
+TTTTTAAATTTTATATAGAGTCTGGAC
+>2436|16|DMCR1A|1
+GGATGGACTGAGAACCGGTATTTT
+>2437|16|DMCR1A|1
+GGATGGACTGAGAACCGGTATTT
+>2442|16|DMCR1A|5
+TTACAAAGGATGGACTGAGAACCGG
+>2444|16|DMCR1A|5
+TTACAAAGGATGGACTGAGAACC
+>2446|16|DMCR1A|6
+TATTTACAAAGGATGGACTGAGAA
+>2447|16|DMCR1A|2
+TATTTACAAAGGATGGACTGAGA