Mercurial > repos > brasset_jensen > srnapipe

diff sRNAPipe.xml @ 58:e12ad81abcbb draft

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Added quotes around fastq_n parameter.
author pierre.pouchin
date Tue, 23 Oct 2018 10:36:18 -0400
parents fef39e626746
children eeb89c3331ad
line wrap: on
line diff
--- a/sRNAPipe.xml	Thu Sep 13 11:45:05 2018 -0400
+++ b/sRNAPipe.xml	Tue Oct 23 10:36:18 2018 -0400
@@ -5,10 +5,10 @@
     ./bin/sRNAPipe.pl
 
     --fastq ${first_input}
-    --fastq_n ${first_input.name}
+    --fastq_n "${first_input.name}"
     #for $input_file in $input_files:
     --fastq ${input_file.additional_input}
-    --fastq_n ${input_file.additional_input.name}
+    --fastq_n "${input_file.additional_input.name}"
     #end for
 
     #if $Genome.refGenomeSource == "history":