Mercurial > repos > brasset_jensen > srnapipe

diff bin/sRNAPipe.pl @ 66:ff36e76d696a draft

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planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit 42877e3bba93278af4319cee455e189712cc85c3
author brasset_jensen
date Wed, 30 Jan 2019 06:26:32 -0500
parents 967512924317
children
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--- a/bin/sRNAPipe.pl	Wed Jan 30 02:41:24 2019 -0500
+++ b/bin/sRNAPipe.pl	Wed Jan 30 06:26:32 2019 -0500
@@ -278,7 +278,7 @@
 
 Usage:
 
-sRNAPipe --fastq <fastq file 1> --fastq_n <name 1> [--fastq <fastq file 2> --fastq_n <name 2> --fastq <fastq file 3> -- fastq_n <name 3> ...] --ref <reference genome> [--build_index] --transcripts <transcripts> [--build_transcripts] --TE <transposable elements> [--build_TE] --miRNAs <miRNAs> [--build_miRNAs] --snRNAs <snRNAs> [--build_snRNAs] --rRNAs <rRNAs> [--build_rRNAs] --tRNAs <tRNAs> [--buid_tRNAs] [options]
+sRNAPipe.pl --fastq <fastq file 1> --fastq_n <name 1> [--fastq <fastq file 2> --fastq_n <name 2> --fastq <fastq file 3> -- fastq_n <name 3> ...] --ref <reference genome> [--build_index] --transcripts <transcripts> [--build_transcripts] --TE <transposable elements> [--build_TE] --miRNAs <miRNAs> [--build_miRNAs] --snRNAs <snRNAs> [--build_snRNAs] --rRNAs <rRNAs> [--build_rRNAs] --tRNAs <tRNAs> [--buid_tRNAs] [options]
 
 Arguments:
 --fastq <fastq file>\t\tFastq file to process