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view test-data/fastq_dir/reads-sample-small.fastq-bonafide_reads-transcripts_uni.fastq @ 71:71d5983dd41e draft

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"planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit d75c5bb2b0fc1f53f648a59312f13f9b23e6a6dc"
author brasset_jensen
date Thu, 06 Feb 2020 11:10:41 -0500
parents 11708af40030
children
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@HWI-ST132:678:C1LFKACXX:6:1313:10358:95570
TAATATAGATTTAAAGTCTAAGAACT
+
@@?B=DDDHHHHHJJJHIJIJJHIJJ
@HWI-ST132:678:C1LFKACXX:6:2108:18887:67124
TAATATAGATTTAAAGTCTAAGAACT
+
BCCFFFFFGHHHH>GHFHJJJIGJJJ
@HWI-ST132:678:C1LFKACXX:6:2101:7667:91449
TAGTATATTTATTAAATCATTTGACT
+
CCCDDEFFHHHHHJJJJJJJJIJJJJ
@HWI-ST132:678:C1LFKACXX:6:2107:9787:36481
TAGTATATTTATTAAATCATTTGACT
+
BBBD:ADDHHHHH4HGHIJJJJJJJJ
@HWI-ST132:678:C1LFKACXX:6:1114:13195:76362
TAATAGTCAGGGCGCGAATTTTTA
+
?@?DDB=DFDDHGIIEBHD=FHIH
@HWI-ST132:678:C1LFKACXX:6:1106:19137:84489
TAATAGTCAGGGCGCGAATTTTTAA
+
BCCFFFDDHFFDDHIIJIIIJJJJJ
@HWI-ST132:678:C1LFKACXX:6:1306:5211:69486
TAATAGTCAGGGCGCGAATTTTTAA
+
BBCFFFFFHHHDFHIJJIGIJJJIJ
@HWI-ST132:678:C1LFKACXX:6:1215:11540:43548
TAATAGTCAGGGCGCGAATTTTTAAAA
+
@<@DFFBDH:CFHHGHHIIIIIIIGGI
@HWI-ST132:678:C1LFKACXX:6:1205:1759:60915
TACTGCCTGTATAGCCACGACATGC
+
JJIGFC)JJIGGHHHHHFFFFFCCC
@HWI-ST132:678:C1LFKACXX:6:1113:20102:16455
TCGTGGCTATACAGGCAGTAGAGC
+
@CCDFFFFAHHHHJHDGJJGGGIJ
@HWI-ST132:678:C1LFKACXX:6:1208:19446:35829
TATACAGGCAGTAGAGCAGGG
+
BCCDDFDFHHHFFHGEFFGIJ
@HWI-ST132:678:C1LFKACXX:6:1111:12238:79012
TATACAGGCAGTAGAGCAGGGGGCC
+
B@BDDFFFHFHHHIJACCFGIHIII
@HWI-ST132:678:C1LFKACXX:6:2103:15635:75406
TATACAGGCAGTAGAGCAGGGGGCC
+
BBBFDFFFH;CAFEACGHEGFGFHI
@HWI-ST132:678:C1LFKACXX:6:1316:8766:16303
CAGGCAGTAGAGCAGGGGGCCGAGG
+
+1:4ABDFHHFFGEHIGAHHHHGEE
@HWI-ST132:678:C1LFKACXX:6:1112:16567:28567
TAGAGCAGGGGGCCGAGGACACTAC
+
BCCFFFFDHHAFHHJJJJGIJJJIJ
@HWI-ST132:678:C1LFKACXX:6:1112:11876:12849
GCAGGGGGCCGAGGACACTACCTT
+
CCCFFFFFHHHHHEFGHIJJJJJJ
@HWI-ST132:678:C1LFKACXX:6:2105:2705:58581
GCAGGGGGCCGAGGACACTACCTT
+
B@CDFDFFHHDDFGGIGIJJJJJJ
@HWI-ST132:678:C1LFKACXX:6:1115:6238:9387
TCCACAAGGTAGTGTCCTCGGCCCC
+
GIIJIJJJJGHBDHFDHDFDD=1;?
@HWI-ST132:678:C1LFKACXX:6:2106:10336:87172
TTCCACAAGGTAGTGTCCTCGGCCC
+
IIIIGIIIIHBHHDCC=FFFFFC@@
@HWI-ST132:678:C1LFKACXX:6:1211:14253:29642
TTCCACAAGGTAGTGTCCTCGGCC
+
IIFIFFAFGBED4DFD=B;AD8<@
@HWI-ST132:678:C1LFKACXX:6:1115:8666:82549
TGTTCCACAAGGTAGTGTCCTCGGCC
+
GEBIIIEFGBFHEFHBC?B;AA=?@?
@HWI-ST132:678:C1LFKACXX:6:2107:18504:90825
ATTGTAAGGATTATGGAAGCC
+
HFFA>2<JHHHFFFFFDFBBB
@HWI-ST132:678:C1LFKACXX:6:1110:14697:50168
TTCCATAATCCTTACAATCCGGACAG
+
CC@DDFFFHHFHHGJJIJJJIJIIJJ
@HWI-ST132:678:C1LFKACXX:6:1116:12616:10056
TTCCATAATCCTTACAATCCGGACAG
+
@B@DFFFFHHHHHJJJJJJJIJJJJI
@HWI-ST132:678:C1LFKACXX:6:1111:20882:35234
TCCTTACAATCCGGACAGCAATCA
+
@@@DD?DDDDHDHG>@GDHEGHIF
@HWI-ST132:678:C1LFKACXX:6:1309:2245:49520
AAATTGAAGGGAGGAGACTGATC
+
@CCF?EFFHHADHIJJIJHGJEH
@HWI-ST132:678:C1LFKACXX:6:1315:7675:36539
TGAAGGGAGGAGACTGATC
+
BC@FFFFFHFHHFJJJJJJ
@HWI-ST132:678:C1LFKACXX:6:2103:15073:18548
CTTCGTTGTCGGCTTAAGACT
+
JIGGEA<20@0A32224B=14
@HWI-ST132:678:C1LFKACXX:6:1208:7900:7428
CTTCGTTGTCGGCTTAAGAC
+
JJJJJJJHFHHHFFDFFCCB
@HWI-ST132:678:C1LFKACXX:6:2108:9483:4135
TCTTCGTTGTCGGCTTAAGAC
+
HF9JJJJIHHHHHFFFFFBCB
@HWI-ST132:678:C1LFKACXX:6:1110:13753:56378
TTTCTTCGTTGTCGGCTTAAG
+
IIGHE@1IHHHHDFDEFF@@@
@HWI-ST132:678:C1LFKACXX:6:1215:9718:26126
TTTATTTCTTCGTTGTCGGCT
+
EHAD@HGGDDDHHDDFFD@@@
@HWI-ST132:678:C1LFKACXX:6:2105:12588:90115
TTTATTTCTTCGTTGTCGGCT
+
JJJJJHJIHFHHHFFFFFCCC
@HWI-ST132:678:C1LFKACXX:6:1115:13122:92533
GATCTTTATTTCTTCGTTGTC
+
JIIJJJJJHHGHHAFFFD@@;
@HWI-ST132:678:C1LFKACXX:6:1208:3856:17346
TTATTGAATCTTCTTGTATAAGAAC
+
CCCFFFFFHHHHHJJHGHJJJIEGI
@HWI-ST132:678:C1LFKACXX:6:1304:2557:40492
TTATTGAATCTTCTTGTATAAGAAC
+
CCCFFFFFHHHHHJJJIIJJJJJJI
@HWI-ST132:678:C1LFKACXX:6:2104:5164:67289
TTATTGAATCTTCTTGTATAAGAAC
+
CCCFFFFFHHHHHJIHEGHJJIIJJ
@HWI-ST132:678:C1LFKACXX:6:1109:12836:45008
TTATTGAATCTTCTTGTATAAGAACT
+
CCCFFFFFHHHHHJJIGIJHIIIJJJ
@HWI-ST132:678:C1LFKACXX:6:1210:20113:93618
TTATTGAATCTTCTTGTATAAGAACT
+
CCCFFFFFHHHHHJIJHIIJJIJIJJ
@HWI-ST132:678:C1LFKACXX:6:1305:3751:96328
GAATTGAGAGTCGGCGTTCGTCA
+
@@CFFFFFHHFHHJJIGIJIFHG
@HWI-ST132:678:C1LFKACXX:6:1106:16380:68115
GAATTGAGAGTCGGCGTTCGTCATG
+
@@@DFDFDF<DFF<GGGIIGFFHDD
@HWI-ST132:678:C1LFKACXX:6:1304:10611:41812
ATTGAGAGTCGGCGTTCGTC
+
@@@DDDDFHHA)@FFFHIJJ
@HWI-ST132:678:C1LFKACXX:6:1111:1671:76365
ATTGAGAGTCGGCGTTCGTCATGCT
+
B@@FFFFFFFFHHJGIJEGEHIJFH
@HWI-ST132:678:C1LFKACXX:6:1307:1274:14519
ACGAACGCCGACTCTCAAT
+
GIGGGIHDADFD@DFD@@@
@HWI-ST132:678:C1LFKACXX:6:1311:4783:35077
TTGAGAGTCGGCGTTCGTCA
+
@@@DDDDDHHDHFGHII;F;
@HWI-ST132:678:C1LFKACXX:6:1313:4260:10051
TTGAGAGTCGGCGTTCGTCATGC
+
?@@+A?B=ADCFF@GHJFGHGGI
@HWI-ST132:678:C1LFKACXX:6:2104:8880:31466
TTGAGAGTCGGCGTTCGTCATGC
+
4:?D=222=C@<@BFHIIJJJJJ
@HWI-ST132:678:C1LFKACXX:6:1306:14209:3479
TTGAGAGTCGGCGTTCGTCATGCT
+
BC@FFFFDHHHHHJJJJIJJJJJJ
@HWI-ST132:678:C1LFKACXX:6:1315:9347:74396
TTGAGAGTCGGCGTTCGTCATGCT
+
@@@ADFEBFFHHHGHGEGIEIIIH
@HWI-ST132:678:C1LFKACXX:6:2105:19689:8525
TTGAGAGTCGGCGTTCGTCATGCT
+
BCCFFFFDHFFAHIJJIGJIHHHI
@HWI-ST132:678:C1LFKACXX:6:1205:5797:96615
TTGAGAGTCGGCGTTCGTCATGCTC
+
=@@DDDFDFF@<@BEFBHJJJHIJJ
@HWI-ST132:678:C1LFKACXX:6:1309:19186:42807
TGAGAGTCGGCGTTCGTCATGCT
+
@@@AAD:?@AAC1CF?8C;GGEF
@HWI-ST132:678:C1LFKACXX:6:1303:11159:24418
TGAGAGTCGGCGTTCGTCATGCTC
+
@@CFFFADFFAF<EE?:CFBFCIJ
@HWI-ST132:678:C1LFKACXX:6:1306:10146:40120
TGAGAGTCGGCGTTCGTCATGCTC
+
@@@FFFBDDHH<04<C@EHCGIJI
@HWI-ST132:678:C1LFKACXX:6:1107:4953:7528
GAGAGTCGGCGTTCGTCATGCTC
+
B?BFB=BDFHFCFHEFHHJIIII
@HWI-ST132:678:C1LFKACXX:6:1207:11386:1971
GAGAGTCGGCGTTCGTCATGCTC
+
@@@FFD4@:?FDHIEIIIIIIII
@HWI-ST132:678:C1LFKACXX:6:2102:9759:37359
GAGAGTCGGCGTTCGTCATGCTCGCG
+
B@@FFDDDHHHHHGE??EHIJJIIII
@HWI-ST132:678:C1LFKACXX:6:1309:20184:93600
GTCGGCGTTCGTCATGCTCGC
+
@@@D?DDDHHHBAH;FFGGG<
@HWI-ST132:678:C1LFKACXX:6:2108:16818:98254
CAGAATGACACTCGCGCCCAGC
+
HF1IHF@EAHHHHHFEDDD@@@
@HWI-ST132:678:C1LFKACXX:6:1109:17048:53561
TCAGAATGACACTCGCGCCCAG
+
JJJJIHGCIHHFC+FFFFFC@@
@HWI-ST132:678:C1LFKACXX:6:1304:7739:94068
TGAGTCAGAATGACACTCGCGCCCA
+
IIIGC@3IIIIIHDFF?DDDDD@@@
@HWI-ST132:678:C1LFKACXX:6:1103:16620:30252
CTATGAGTCAGAATGACACTCGCGCC
+
JJJJJJHIHFA+HHHAHHFFFFFCCB
@HWI-ST132:678:C1LFKACXX:6:2108:12557:44439
TAAGATAACAATTCACTATGTATT
+
@CCFFFFFHHHHHJHJJJIIJJJJ
@HWI-ST132:678:C1LFKACXX:6:1208:19238:68182
TCTTGCATCGCATAGAGCGTCTCTT
+
CCCFFFDEHHHHHGGGIJIGHHIIJ
@HWI-ST132:678:C1LFKACXX:6:1101:6334:49873
TCTGAAAGCGAAAGAGACGCTCTATG
+
JIIJIJIHEAFHHHFFC==;DADBB=
@HWI-ST132:678:C1LFKACXX:6:1115:13254:29928
AACAACCGATTTTGTGCGGAGC
+
@@?DDDDFHFFDHIHHIIIIEH
@HWI-ST132:678:C1LFKACXX:6:1302:1607:12753
TTTATCGTGCTCCGCACAAAATCGG
+
JJJIIHJIJIIGHHHHHDFFFFCBB
@HWI-ST132:678:C1LFKACXX:6:1116:8385:7835
TTGTGCGGAGCACGATAAAAACGTCT
+
?@@BDDDDACCDHI>FIIEHGA@GHI
@HWI-ST132:678:C1LFKACXX:6:1110:18660:53708
TAAAAACGTCTTCACACGTCGGCGA
+
@CCFFFFFFHHGH:FHIJIJJJJJG
@HWI-ST132:678:C1LFKACXX:6:1115:15225:46346
AAAACGTCTTCACACGTCGGCGATCG
+
11:=BDEFHHHHHIHJIJIIGJJIJI
@HWI-ST132:678:C1LFKACXX:6:1111:2673:95166
AAACGTCTTCACACGTCGGCGATC
+
@@CFFFFFHHHHGIJEGHIIIJJI
@HWI-ST132:678:C1LFKACXX:6:1311:17287:78819
AAACGTCTTCACACGTCGGCGATC
+
CCCFFFFFHHHHHJJEGHEHIIJJ
@HWI-ST132:678:C1LFKACXX:6:1107:8413:99359
TTCGATCGCCGACGTGTGAAGACGT
+
DJJJHGEDFC:2<<@HGDDDDD?==
@HWI-ST132:678:C1LFKACXX:6:1108:8510:38170
TTCGATCGCCGACGTGTGAAGACGT
+
FHGIIHHBE;FJHHFHHFFDDF@@@
@HWI-ST132:678:C1LFKACXX:6:1112:19354:79890
TTCGATCGCCGACGTGTGAAGACGT
+
GJJJGHD?:C?GC@CHGFFFFF@B=
@HWI-ST132:678:C1LFKACXX:6:1206:18499:41720
TTCGATCGCCGACGTGTGAAGACGT
+
IJJJJJJJJHFIHHHHHFFFFFCCC
@HWI-ST132:678:C1LFKACXX:6:1303:11017:23028
TTCGATCGCCGACGTGTGAAGACGT
+
IIIHD9FC:?:GDCCHHD?DDD@@?
@HWI-ST132:678:C1LFKACXX:6:1310:20517:19080
TTCGATCGCCGACGTGTGAAGACGT
+
FHGGGF?GGFEHHHFHGFFFFFCCC
@HWI-ST132:678:C1LFKACXX:6:1312:14124:76448
TTCGATCGCCGACGTGTGAAGACGT
+
JJJIHGDHEHHJHHHHGFFEFF@C@
@HWI-ST132:678:C1LFKACXX:6:1313:16741:57946
TTCGATCGCCGACGTGTGAAGACGT
+
AIIJJJIHFFGDHHHHHFFFDFCC@
@HWI-ST132:678:C1LFKACXX:6:2103:17863:69050
TTCGATCGCCGACGTGTGAAGACGT
+
GIJJJJIIHFGIHFHHHFFFFFCCB
@HWI-ST132:678:C1LFKACXX:6:1209:11809:98806
AACCTCCTAGTCGCTGTGACT
+
JJIJIJIGGHHHHFFFFFBCB
@HWI-ST132:678:C1LFKACXX:6:2102:9712:32185
ATTGAACTGAAGCCCCCGGCC
+
?@@BBDBDDFFADHIIIH)?F