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view test-data/res_files/reads-sample-small.fastq-siRNAs-TEs.html @ 74:fe3a93edb210 draft default tip

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planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit b10ab97380b0f2f5850138b9ddc03cd6afae1a9d
author brasset_jensen
date Fri, 30 Sep 2022 14:46:12 +0000
parents 11708af40030
children
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  <!DOCTYPE html>
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  <title>pipeline</title>
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  <span class="icon-bar"></span>
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  <a class="brand" href="report.txt">Report</a>
  <div class="nav-collapse collapse">
  <ul class="nav">
  <li class="active"><a href="reads-sample-small.fastq.html">reads-sample-small.fastq</a></li>
  </ul>
  </div><!--/.nav-collapse -->
  </div>
  </div>
  </div>
  <div class="container">
  <div class="featurette">
  <h1>Transposable elements</h1>
  <p class="featurette-p">
  <A HREF="reads-sample-small.fastq/subgroups/siRNAs//siRNAs-TEs_minus.bedgraph">bedgraph minus strand</A><br/> 
<A HREF="reads-sample-small.fastq/subgroups/siRNAs//siRNAs-TEs_plus.bedgraph">bedgraph plus strand</A><br/> 
<A HREF="reads-sample-small.fastq/subgroups/siRNAs//siRNAs-TEs_reads_counts.txt">read number per TE 0 to 3 mismatches (txt)</A><br/> 
<A HREF="reads-sample-small.fastq/subgroups/siRNAs//siRNAs-TEs_reads_counts_mismatches.txt">read number per TE with 1 to 3 mismatches (txt)</A><br/> 
<A HREF="reads-sample-small.fastq/subgroups/siRNAs//siRNAs-TEs_reads_counts_nomismatches.txt">read number per TE with no mismatch (txt)</A><br/> 
<A HREF="reads-sample-small.fastq/subgroups/siRNAs//siRNAs-TEs_sorted.bam">TEs mappers (sorted bam)</A><br/> 
<A HREF="reads-sample-small.fastq/subgroups/siRNAs//siRNAs-TEs_unique_sorted.bam">TEs unique mappers (sorted bam)</A><br/> 

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    <li>
    <a class="thumb"  href="reads-sample-small.fastq/subgroups/siRNAs//Gviz_TEs/G6_DM.png" title="G6_DM">G6_DM</a>
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    <li>
    <a class="thumb"  href="reads-sample-small.fastq/subgroups/siRNAs//Gviz_TEs/Gypsy2-LTR_DM.png" title="Gypsy2-LTR_DM">Gypsy2-LTR_DM</a>
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