Mercurial > repos > brenninc > directory_reader_limited_by_data_table
comparison tool-data/directory_data.loc.sample @ 0:b737d0ed42be draft default tip
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| author | brenninc |
|---|---|
| date | Tue, 21 Jun 2016 03:38:52 -0400 |
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| -1:000000000000 | 0:b737d0ed42be |
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| 1 #This file lists the directories that can be read in | |
| 2 | |
| 3 #This file has the format (white space characters are TAB characters): | |
| 4 # | |
| 5 #<unique_build_id> <dbkey> <display_name> <original_extension> <galaxy_extension> <decompress> <path> | |
| 6 # | |
| 7 #original_extension should not include the starting . | |
| 8 # | |
| 9 #galaxy_extension should be one listed in galaxy/config/datatypes_conf.xml (or xml.sample) | |
| 10 # | |
| 11 #decompress should be No or Yes | |
| 12 # | |
| 13 #So, data_manager.loc could look something like this: (whitespace is tabs) | |
| 14 # | |
| 15 #john_12 john_12 John's fastq files batch 12 fastq.gz fastqsanger Yes /data/john/batch12 | |
| 16 # | |
| 17 #Your directory_data.loc file should contain an entry for each path and extension pair | |
| 18 # | |
| 19 |