Mercurial > repos > brigidar > getfasta

comparison getfasta.xml @ 1:63d8d535d834 draft

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author brigidar
date Tue, 20 Oct 2015 21:18:29 -0400
parents 28c130b826a3
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0:28c130b826a3 1:63d8d535d834
1 <tool id="bedtools_getfasta" name="extract fasta from bed" version="0.2.0"> 1 <tool id="bedtools_getfasta" name="extract fasta from bed" version="0.3.0">
2 2
3 <description> 3 <description>
4 </description> 4 </description>
5 5
6 <requirements> 6 <requirements>
7 <requirement type="binary">bedTofasta</requirement> 7 <requirement type="package" version="2.22">bedtools</requirement>
8 </requirements> 8 </requirements>
9 9
10 <command> 10 <command>
11 bedtools getfasta -fi '$input' -bed '$bedfile' -fo output.out 11 bedtools getfasta -fi '$input' -bed '$bedfile' -fo output.out
12 </command> 12 </command>