<tool id="select_product" name="select_product" version="0.2">
    <description>define product names to sort on and flanking region</description>
    <requirements>
           
       </requirements>
    <command iterpreter="python">
        select_product.py
        -g $input_file
        -n $number
        -k $keys
        > output_file
    </command>

    <inputs>
        <param format="gbk" name="input_file" type="data" label="reference genbank file"/>
         <param name="number" type="integer" value="50" label="flanking region"/>
         <param name="keys" type="text" label=" list of keys separated by comma of product names"/>
    </inputs>


    <outputs>
        <data format="tabular" name="output_file" from_work_dir="output_file">
        </data>

        
    </outputs>
    
    <tests>
    <!-- Empty -->
    </tests>

    <help>
        
.. class:: infomark

**What it does**


Finds all CDS that match the key words provided in the comma separated argument -k in the product description adds a given number of bases on each side of the transcript for the exclusion set


-------------

.. class:: infomark

**Tool Author**

Brigida Rusconi


    </help>
</tool>