# HG changeset patch
# User brigidar
# Date 1444333007 14400
# Node ID c76d2a6bedee3e9c3e41a515dccbecc4796ecd0c
# Parent  6497d42015aaf8cf51b2be59181e489b68f5cf6e
Uploaded

diff -r 6497d42015aa -r c76d2a6bedee select_product.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/select_product.xml	Thu Oct 08 15:36:47 2015 -0400
@@ -0,0 +1,49 @@
+<tool id="select_product" name="select_product" version="0.1">
+    <description>Finds all CDS that match the key words provided in the comma separated argument -k in the product description adds a given number of bases on each side of the transcript for the exclusion set</description>
+    <requirements>
+           
+       </requirements>
+    <command iterpreter="python">
+        select_product.py
+        -g $input_file
+        -n $number
+        -k $keys
+        > output_file
+    </command>
+
+    <inputs>
+        <param format="gbk" name="input_file" type="data" label="reference genbank file"/>
+         <param name="number" type="integer" value="50" label="flanking region"/>
+         <param name="keys" type="text" label=" list of keys separated by comma of product names">
+    </inputs>
+
+
+    <outputs>
+        <data format="tabular" name="output_file" from_work_dir="output_file">
+        </data>
+
+        
+    </outputs>
+    
+    <tests>
+    <!-- Empty -->
+    </tests>
+
+    <help>
+        
+.. class:: infomark
+
+**What it does**
+
+wrapper for select product script
+-------------
+
+.. class:: infomark
+
+**Tool Author**
+
+Brigida Rusconi
+
+
+    </help>
+</tool>
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