Mercurial > repos > brinkmanlab > extract_tree_order

comparison extract_tree_order.xml @ 1:ddf5427278ee draft

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"planemo upload for repository https://github.com/brinkmanlab/galaxy-tools/tree/master/<name of containing folder> commit a7380cf90205de589a64fe0105ea957402d62300"
author brinkmanlab
date Tue, 16 Jun 2020 12:50:07 -0400
parents e9f04f5172e4
children eb980e8bb133
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0:e9f04f5172e4 1:ddf5427278ee
8 <edam_operation>operation_0326</edam_operation> 8 <edam_operation>operation_0326</edam_operation>
9 <edam_operation>operation_3434</edam_operation> 9 <edam_operation>operation_3434</edam_operation>
10 </edam_operations> 10 </edam_operations>
11 <requirements> 11 <requirements>
12 <requirement type="package" version="3.7">python</requirement> 12 <requirement type="package" version="3.7">python</requirement>
13 <requirement type="package" version="1.73">biopython</requirement> 13 <requirement type="package" version="1.76">biopython</requirement>
14 </requirements> 14 </requirements>
15 <command detect_errors="aggressive"><![CDATA[ 15 <command detect_errors="aggressive"><![CDATA[
16 python -c \$'from Bio import Phylo\nfor clade in Phylo.read("$input", "newick").get_terminals(order="preorder"): print(clade.name)' > '$output' 16 python -c \$'from Bio import Phylo\nfor clade in Phylo.read("$input", "newick").get_terminals(order="preorder"): print(clade.name)' > '$output'
17 ]]></command> 17 ]]></command>
18 <inputs> 18 <inputs>