Mercurial > repos > brinkmanlab > extract_tree_order

comparison extract_tree_order.xml @ 2:eb980e8bb133 draft default tip

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"planemo upload for repository https://github.com/brinkmanlab/galaxy-tools/tree/master/<name of containing folder> commit 669399887aebfe546eae29022f446664d9b52d44"
author brinkmanlab
date Sat, 05 Sep 2020 08:30:33 +0000
parents ddf5427278ee
children
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1:ddf5427278ee 2:eb980e8bb133
7 <edam_operations> 7 <edam_operations>
8 <edam_operation>operation_0326</edam_operation> 8 <edam_operation>operation_0326</edam_operation>
9 <edam_operation>operation_3434</edam_operation> 9 <edam_operation>operation_3434</edam_operation>
10 </edam_operations> 10 </edam_operations>
11 <requirements> 11 <requirements>
12 <requirement type="package" version="3.7">python</requirement>
13 <requirement type="package" version="1.76">biopython</requirement> 12 <requirement type="package" version="1.76">biopython</requirement>
14 </requirements> 13 </requirements>
15 <command detect_errors="aggressive"><![CDATA[ 14 <command detect_errors="aggressive"><![CDATA[
16 python -c \$'from Bio import Phylo\nfor clade in Phylo.read("$input", "newick").get_terminals(order="preorder"): print(clade.name)' > '$output' 15 python -c \$'from Bio import Phylo\nfor clade in Phylo.read("$input", "newick").get_terminals(order="preorder"): print(clade.name)' > '$output'
17 ]]></command> 16 ]]></command>