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"planemo upload for repository https://github.com/brinkmanlab/galaxy-tools/tree/master/hash commit 33b02e08cbc8f76fb4b8537f8c968393f85a1b5e-dirty"
author brinkmanlab
date Fri, 24 Jan 2020 18:00:03 -0500
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f680aef3456b "planemo upload for repository https://github.com/brinkmanlab/galaxy-tools/tree/master/hash commit 33b02e08cbc8f76fb4b8537f8c968393f85a1b5e-dirty"
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1 <tool id="sha256sum" name="Coreutils sha256sum" version="1.0" profile="16.04">
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2 <description>Generate or check SHA256 (256-bit) checksums</description>
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3 <edam_topics>
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4 <edam_topic>topic_3572</edam_topic>
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5 </edam_topics>
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6 <edam_operations>
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7 <edam_operation>operation_3283</edam_operation>
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8 <edam_operation>operation_3348</edam_operation>
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9 </edam_operations>
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10 <requirements>
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11 <requirement type="package">coreutils</requirement>
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12 </requirements>
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13 <version_command><![CDATA[ sha256sum --version ]]></version_command>
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14 <command detect_errors="aggressive"><![CDATA[
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15 #if $input.is_of_type("binary")
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16 #set $type = '--binary'
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17 #else
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18 #set $type = '--text'
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19 #end if
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20 #if $mode_select.mode == '--check'
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21 echo '$input' | cat $mode_select.hash - | sha256sum $tag $type $mode_select.mode --warn --status
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22 #else
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23 sha256sum $tag $type $input | sed 's/ .*//' > $output
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24 #end if
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25 ]]></command>
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26 <inputs>
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27 <param name="input" type="data" format="data" label="Input" />
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28 <conditional name="mode_select">
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29 <param name="mode" type="select" label="Mode">
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30 <option value="" selected="true">Generate hash</option>
f680aef3456b "planemo upload for repository https://github.com/brinkmanlab/galaxy-tools/tree/master/hash commit 33b02e08cbc8f76fb4b8537f8c968393f85a1b5e-dirty"
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31 <option value="--check">Compare hash</option>
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32 </param>
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33 <when value="">
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34 </when>
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35 <when value="--check">
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36 <param name="hash" type="data" format="txt" label="Hash" />
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37 </when>
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38 </conditional>
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39 <param name="tag" type="boolean" truevalue="--tag" falsevalue="" checked="false" label="Create a BSD-style checksum" />
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40 </inputs>
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41 <outputs>
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42 <data name="output" format="txt" />
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43 </outputs>
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44 <tests>
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45 <test expect_num_outputs="1">
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46 <param name="input" value="test-data/test.txt" ftype="txt" />
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47 <output name="output" ftype="txt" >
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48 <assert_contents>
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49 <has_text text="53a8b4455d54e2d67c24c44763330338d65c883d9053d752710bc4e67e674b65" />
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50 </assert_contents>
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51 </output>
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52 </test>
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53 </tests>
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54 <help><![CDATA[
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55 GNU coreutils online help: <http://www.gnu.org/software/coreutils/>
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56 ]]></help>
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57 <citations>
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58 <citation type="doi">10.5281/zenodo.3364789</citation>
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59 </citations>
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60 </tool>