Mercurial > repos > brinkmanlab > parsnp

diff ParSNP.xml @ 2:22bf5b566ce2 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/brinkmanlab/galaxy-tools/tree/master/parsnp commit a1f5a7f37fe4e85f7aca1a1476ab30468e1d1578"
author brinkmanlab
date Fri, 13 Mar 2020 14:39:56 -0400
parents 2e855db9b19b
children 2aeddc0a7b0e
line wrap: on
line diff
--- a/ParSNP.xml	Thu Mar 12 19:38:17 2020 -0400
+++ b/ParSNP.xml	Fri Mar 13 14:39:56 2020 -0400
@@ -14,8 +14,8 @@
     </requirements>
     <version_command><![CDATA[parsnp -V |& tail -n1]]></version_command>
     <command detect_errors="aggressive"><![CDATA[
-    export MEMORY_LIMIT=`expr ${GALAXY_MEMORY_MB:-0} \* 1000`;
-    [[ $MEMORY_LIMIT -eq 0 ]] && export MEMORY_LIMIT=;
+    export MEMORY_LIMIT=`expr \${GALAXY_MEMORY_MB:-0} \\* 1000`;
+    [[ \$MEMORY_LIMIT -eq 0 ]] && export MEMORY_LIMIT=;
     export GENOME_DIR=\$(mktemp -d -p `pwd`)
     #for $genome in $genomes
         && ln -sf '$genome'