Mercurial > repos > cavelandiah > mirnature
annotate macros.xml @ 0:4394f98e705e draft default tip
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
author | cavelandiah |
---|---|
date | Sun, 27 Nov 2022 22:00:05 +0000 |
parents | |
children |
rev | line source |
---|---|
0
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
1 <macros> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
2 <token name="@TOOL_VERSION@">1.1</token> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
3 <token name="@VERSION_SUFFIX@">0</token> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
4 <token name="@ADDTHREADS@"><![CDATA[ |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
5 ##compute the number of ADDITIONAL threads to be used (--cpu) |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
6 addthreads=\${GALAXY_SLOTS:-1} && (( addthreads-- )) && |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
7 ]]></token> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
8 <token name="@CPU@"> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
9 --cpu \$addthreads |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
10 </token> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
11 <xml name="requirements"> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
12 <requirements> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
13 <requirement type="package" version="20220922">parallel</requirement> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
14 <requirement type="package" version="1.1">mirnature</requirement> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
15 <yield/> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
16 </requirements> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
17 </xml> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
18 <xml name="citations"> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
19 <citations> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
20 <citation type="doi">10.3390/genes12030348</citation> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
21 <yield /> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
22 </citations> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
23 </xml> |
4394f98e705e
"planemo upload for repository https://github.com/Bierinformatik/miRNAture/tree/galaxy_add/Galaxy/miRNAture commit 47a893683a9445abddce77c28f43d098b62cf385"
cavelandiah
parents:
diff
changeset
|
24 </macros> |