Mercurial > repos > cheanney > db2db
comparison db2db.xml @ 4:0895298631ea draft
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author | cheanney |
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date | Thu, 09 Jul 2015 09:38:54 -0400 |
parents | d4e959143115 |
children |
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3:d4e959143115 | 4:0895298631ea |
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1 <tool id="db2db" name="db2db" version="1.0"> | 1 <tool id="db2db" name="db2db" version="1.0"> |
2 <description></description> | 2 <description></description> |
3 <command interpreter="/usr/bin/php"> | 3 <command interpreter="/usr/bin/php"> |
4 /mnt/webrepo/fr-s-bsg-bio-d/htdocs/biodbnet_wrapper/db2dbRestClient.php input='$input' inputValues='$inputValues' outputs='$output' taxonId='$taxon' fileType='$filetype' > $result | 4 db2dbRestClient.php input='$input' inputValues='$inputValues' outputs='$output' taxonId='$taxon' fileType='$filetype' > $result |
5 </command> | 5 </command> |
6 <inputs> | 6 <inputs> |
7 <param name="input" type="text" size="30" label="Enter an input ID name" /> | 7 <param name="input" type="text" size="30" label="Enter an input ID name" /> |
8 <param name="inputValues" type="text" area="true" size="4x40" label="Paste input ID value(s)" /> | 8 <param name="inputValues" type="text" area="true" size="4x40" label="Paste input ID value(s)" /> |
9 <param name="output" type="text" size="30" label="Enter an output ID name(s)" /> | 9 <param name="output" type="text" size="30" label="Enter an output ID name(s)" /> |
35 | 35 |
36 ----- | 36 ----- |
37 | 37 |
38 | 38 |
39 **Usage** | 39 **Usage** |
40 /mnt/webrepo/fr-s-bsg-bio-d/htdocs/biodbnet_wrapper/db2dbClient.php input='Ensembl Gene ID' inputValues='ENSG00000121410, ENSG00000171428' ouptput='Gene Symbol, Ensembl Protein ID' taxonId='9606'(optional) | 40 db2dbClient.php input='Ensembl Gene ID' inputValues='ENSG00000121410, ENSG00000171428' ouptput='Gene Symbol, Ensembl Protein ID' taxonId='9606'(optional) |
41 </help> | 41 </help> |
42 </tool> | 42 </tool> |