Mercurial > repos > chemteam > mdanalysis_distance

comparison dihedrals.py @ 1:2b1434ec8c7e draft

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planemo upload for repository https://github.com/galaxycomputationalchemistry/galaxy-tools-compchem/ commit 9b44a37fc1a0c338693f54eaf52b582439ca9f0c
author chemteam
date Thu, 20 Dec 2018 06:48:23 -0500
parents c33b972fe040
children 489b25966bb9
comparison
equal deleted inserted replaced
0:c33b972fe040 1:2b1434ec8c7e
6 6
7 import MDAnalysis as mda 7 import MDAnalysis as mda
8 from MDAnalysis.lib.distances import calc_dihedrals 8 from MDAnalysis.lib.distances import calc_dihedrals
9 9
10 import matplotlib 10 import matplotlib
11 matplotlib.use('Agg') # noqa
11 import matplotlib.pyplot as plt 12 import matplotlib.pyplot as plt
12 13
13 import numpy as np 14 import numpy as np
14
15 matplotlib.use('Agg')
16 15
17 16
18 def parse_command_line(argv): 17 def parse_command_line(argv):
19 parser = argparse.ArgumentParser() 18 parser = argparse.ArgumentParser()
20 parser.add_argument('--idcd', help='input dcd') 19 parser.add_argument('--idcd', help='input dcd')