Mercurial > repos > chrisb > gap_all_glycan_tools

diff get_data/kegg_glycan/README_KEGG.md @ 1:0a5e0df17054 draft default tip

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author chrisb
date Fri, 06 May 2016 08:05:48 -0400
parents 89592faa2875
children
line wrap: on
line diff
--- a/get_data/kegg_glycan/README_KEGG.md	Wed Mar 23 14:35:56 2016 -0400
+++ b/get_data/kegg_glycan/README_KEGG.md	Fri May 06 08:05:48 2016 -0400
@@ -20,6 +20,9 @@
 findKEGG.py -d $dbname -q $searchpattern -o $output
 ```
 
+## Known Issues
+Yes, the and/or functionality of the KEGG rest API (Release 78.0+/05-05, May 16 ) does not always function as expected. This has been resolved in the code. More details,  [KEGGnotes.md ](KEGGnotes.md)
+
 ## Help
 ```
 ../../virtualpy/bin/activate
@@ -31,7 +34,7 @@
 
 ```
 ../../virtualpy/bin/activate
-python  test_findKEGG.py
+nosetests  test_findKEGG.py
 ```
 
 # 2. getkcfKEGG,py
@@ -67,7 +70,7 @@
 
 ```
 ../../virtualpy/bin/activate
-python  test_getkcfKEGG.py
+nosetests  test_getkcfKEGG.py
 ```
 
 # 3. linkKEGG.py
@@ -101,6 +104,6 @@
 
 ```
 ../../virtualpy/bin/activate
-python  test_linkKEGG.py
+nosetests  test_linkKEGG.py
 ```