Mercurial > repos > climate > c3s
annotate c3s.sh @ 0:250554670f72 draft
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
author | climate |
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date | Tue, 13 Apr 2021 18:32:45 +0000 |
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children | bd153c794da1 |
rev | line source |
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0
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
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1 #!/usr/bin/env bash |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
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2 |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
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3 if [ -f download.tar.gz ]; then |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
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4 tar zxvf download.tar.gz |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff
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5 cat *.grib > tmp.grib |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff
changeset
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6 cdo setgridtype,regular tmp.grib tmpg.grib |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff
changeset
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7 cdo -f nc -t ecmwf copy tmpg.grib tmp.nc |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff
changeset
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8 elif [ -f download.zip ]; then |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff
changeset
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9 unzip download.zip |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff
changeset
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10 cat *.grib > tmp.grib |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff
changeset
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11 cdo setgridtype,regular tmp.grib tmpg.grib |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff
changeset
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12 cdo -f nc -t ecmwf copy tmpg.grib tmp.nc |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff
changeset
|
13 elif [ -f download.grib ]; then |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff
changeset
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14 cdo -f nc -t ecmwf copy download.grib tmp.nc |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff
changeset
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15 elif [ -f download.nc ]; then |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff
changeset
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16 mv download.nc tmp.nc |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff
changeset
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17 else |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff
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18 echo "No data found! Check your request and/or credentials." |
250554670f72
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/c3s commit 04069ef63198279caf3d97de5a58fb32df12c811"
climate
parents:
diff
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19 fi |