Mercurial > repos > climate > cdo_info
diff cdo_info.xml @ 0:8e0ae5c594e7 draft default tip
"planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/cdo commit da614bb8e3e9b19a5167ff19b625a71d9976108a"
author | climate |
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date | Sat, 15 Jan 2022 23:20:26 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/cdo_info.xml Sat Jan 15 23:20:26 2022 +0000 @@ -0,0 +1,78 @@ +<tool id="cdo_info" name="CDO get info" profile="20.05" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"> + <description>Climate Data Information Operators to get information on Climate and NWP model data</description> + <macros> + <import>macros.xml</import> + <import>macros_info.xml</import> + </macros> + <expand macro="edam_ontology"/> + <expand macro="cdo_requirements"/> + <expand macro="cdo_stdio"/> + <command><![CDATA[ + cdo + '$information.opt' + '$main_infile' + #if str($information.opt) == 'diff' or str($information.opt) == 'diffn' + '$information.secondary_infile' + #end if + > '$info' + ]]> </command> + <inputs> + <expand macro="operator_information"/> + </inputs> + <outputs> + <data name="info" format="txt"/> + </outputs> + <tests> + <test> + <param name="main_infile" ftype="netcdf" value="longitude.nc"/> + <conditional name="information"> + <param name="opt" value="info" /> + </conditional> + <output name="info" value="longitude.txt" compare="diff" lines_diff="2"/> + </test> + <test> + <param name="main_infile" ftype="netcdf" value="latitude.nc"/> + <conditional name="information"> + <param name="diff" value="info" /> + <param name="secondary_infile" ftype="netcdf" value="latitude_modified.nc"/> + </conditional> + <output name="info" value="latitude_diff.txt" compare="diff" lines_diff="2"/> + </test> + <test> + <param name="main_infile" ftype="netcdf" value="WMI_Lear.nc"/> + <conditional name="information"> + <param name="opt" value="showdate" /> + </conditional> + <output name="info" value="WMI_Lear_showdate.txt" compare="diff" lines_diff="2"/> + </test> + <test> + <param name="main_infile" ftype="netcdf" value="WMI_Lear.nc"/> + <conditional name="information"> + <param name="opt" value="griddes" /> + </conditional> + <output name="info" value="WMI_Lear_griddes.txt" compare="diff" lines_diff="2"/> + </test> + <test> + <param name="main_infile" ftype="netcdf" value="WMI_Lear.nc"/> + <conditional name="information"> + <param name="opt" value="showname" /> + </conditional> + <output name="info" value="WMI_Lear_names.txt" compare="diff" lines_diff="2"/> + </test> + </tests> + <help><![CDATA[ + +**CDO Climate Data Information Operators** +======================================================================================================= + +This tool is a wrapper to the Climate Data Operators (CDO) for all Information Operators. + +- CDO Information operators return information about the input file(s). Output is written in a text file. +- CDO is a collection of command line Operators to manipulate and analyse Climate and NWP model Data. +- There are more than 600 operators available. + +- `CDO online documentation <https://code.mpimet.mpg.de/projects/cdo/>`_. + + ]]> </help> + <expand macro="citations"/> +</tool>