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annotate save_logs.sh @ 0:7a7ba86e95a4 draft default tip

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"planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
author climate
date Tue, 15 Jun 2021 09:39:23 +0000
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7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
parents:
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1 #!/usr/bin/env bash
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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3 WORKDIR=$1
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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4 LOGDIR=$2
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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5 INFO_FILE=$3
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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7 echo "===================================================================="
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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8 echo " Save logfiles from CESM run "
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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9 echo "===================================================================="
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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11 for log_type in atm cesm cpl lnd rof; do
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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12 nb=$(find $WORKDIR -type f -name "$log_type.log.*" | wc -l)
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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13 nbz=$(find $WORKDIR -type f -name "$log_type.log.*.gz" | wc -l)
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
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7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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15 if [[ $nb -gt 0 ]]; then
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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16 if [[ $nb -gt 0 ]]; then
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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17 gunzip $1/${log_type}.log.*.gz
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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18 fi
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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19 cat $1/${log_type}.* > $2/${log_type}_log.txt 2>>$INFO_FILE
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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20 fi
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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21 done
7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
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7a7ba86e95a4 "planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
climate
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23 echo "Logfiles saved."