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"planemo upload for repository https://github.com/ESCOMP/CESM commit 5c969e494841237de0b2301520d9321672cc9f5b"
author | climate |
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date | Tue, 15 Jun 2021 09:39:23 +0000 |
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Compset longname is 2000_CAM%KESSLER_SLND_SICE_SOCN_SROF_SGLC_SWAV Compset specification file is /usr/local/cime/../components/cam//cime_config/config_compsets.xml Compset forcing is 1972-2004 ATM component is CAM simplified and non-versioned physics :CAM moist dynamical core test with Ullrich et al. (2014) baroclinic wave IC, Kessler physics and terminator chemistry: LND component is Stub land component ICE component is Stub ice component OCN component is Stub ocn component ROF component is Stub river component GLC component is Stub glacier (land ice) component WAV component is Stub wave component ESP component is Compset specific settings: name is SSTICE_DATA_FILENAME and value is $DIN_LOC_ROOT/atm/cam/sst/sst_HadOIBl_bc_1x1_2000climo_c180511.nc Could not find machine match for '8d9a28f7d4de' or '8d9a28f7d4de' Machine is galaxy Pes setting: grid is a%ne30np4_l%null_oi%null_r%null_g%null_w%null_m%gx1v6 Pes setting: compset is 2000_CAM%KESSLER_SLND_SICE_SOCN_SROF_SGLC_SWAV Pes setting: tasks is {'NTASKS_ATM': -1, 'NTASKS_ROF': -1, 'NTASKS_OCN': -1, 'NTASKS_ICE': -1, 'NTASKS_CPL': -1, 'NTASKS_LND': -1, 'NTASKS_GLC': -1, 'NTASKS_WAV': -1, 'NTASKS_ESP': -1} Pes setting: threads is {'NTHRDS_ATM': 1, 'NTHRDS_LND': 1, 'NTHRDS_ROF': 1, 'NTHRDS_ICE': 1, 'NTHRDS_OCN': 1, 'NTHRDS_GLC': 1, 'NTHRDS_WAV': 1, 'NTHRDS_ESP': 1, 'NTHRDS_CPL': 1} Pes setting: rootpe is {'ROOTPE_ATM': 0, 'ROOTPE_ROF': 0, 'ROOTPE_ICE': 0, 'ROOTPE_OCN': 0, 'ROOTPE_CPL': 0, 'ROOTPE_LND': 0, 'ROOTPE_GLC': 0, 'ROOTPE_WAV': 0, 'ROOTPE_ESP': 0} Pes setting: pstrid is {} Pes other settings: {} Pes comments: none Compset is: 2000_CAM%KESSLER_SLND_SICE_SOCN_SROF_SGLC_SWAV Grid is: a%ne30np4_l%null_oi%null_r%null_g%null_w%null_m%gx1v6 Components in compset are: ['cam', 'slnd', 'sice', 'socn', 'srof', 'sglc', 'swav', 'sesp', 'drv', 'dart'] No project info available No charge_account info available, using value from PROJECT No project info available WARNING: No cesm Model version found. Batch_system_type is none Creating Case directory /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/FKESSLER Setting resource.RLIMIT_STACK to -1 from (8388608, -1) /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/FKESSLER/env_mach_specific.xml already exists, delete to replace Creating batch scripts Writing case.run script from input template /usr/local/cime/config/cesm/machines/template.case.run Creating file .case.run Writing case.st_archive script from input template /usr/local/cime/config/cesm/machines/template.st_archive Creating file case.st_archive Creating user_nl_xxx files for components and cpl If an old case build already exists, might want to run 'case.build --clean' before building You can now run './preview_run' to get more info on how your case will be run Building case in directory /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/FKESSLER sharedlib_only is False model_only is False Setting resource.RLIMIT_STACK to -1 from (8388608, -1) Generating component namelists as part of build Creating component namelists Calling /usr/local/components/cam//cime_config/buildnml ...calling cam buildcpp to set build time options CAM namelist copy: file1 /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/FKESSLER/Buildconf/camconf/atm_in file2 /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/run/atm_in Calling /usr/local/cime/src/components/stub_comps/slnd/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/sice/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/socn/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/srof/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/sglc/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/swav/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/sesp/cime_config/buildnml Calling /usr/local/cime/src/drivers/mct/cime_config/buildnml Finished creating component namelists Building gptl with output to file /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/bld/gptl.bldlog.210610-090728 Calling /usr/local/cime/src/build_scripts/buildlib.gptl Component gptl build complete with 2 warnings Building mct with output to file /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/bld/mct.bldlog.210610-090728 Calling /usr/local/cime/src/build_scripts/buildlib.mct Building pio with output to file /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/bld/pio.bldlog.210610-090728 Calling /usr/local/cime/src/build_scripts/buildlib.pio Building csm_share with output to file /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/bld/csm_share.bldlog.210610-090728 Calling /usr/local/cime/src/build_scripts/buildlib.csm_share Component csm_share build complete with 3 warnings Building atm with output to /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/bld/atm.bldlog.210610-090728 Building lnd with output to /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/bld/lnd.bldlog.210610-090728 Building ice with output to /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/bld/ice.bldlog.210610-090728 Building ocn with output to /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/bld/ocn.bldlog.210610-090728 Building rof with output to /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/bld/rof.bldlog.210610-090728 Building glc with output to /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/bld/glc.bldlog.210610-090728 Building wav with output to /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/bld/wav.bldlog.210610-090728 Building esp with output to /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/bld/esp.bldlog.210610-090728 socn built in 19.047444 seconds srof built in 19.346783 seconds slnd built in 19.459242 seconds sesp built in 19.410775 seconds sice built in 19.949074 seconds sglc built in 19.996156 seconds swav built in 19.901150 seconds Component atm build complete with 5 warnings cam built in 399.094755 seconds Building cesm with output to /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/bld/cesm.bldlog.210610-090728 Component cesm exe build complete with 3 warnings Time spent not building: 0.552427 sec Time spent building: 522.195230 sec MODEL BUILD HAS FINISHED SUCCESSFULLY Setting resource.RLIMIT_STACK to -1 from (8388608, -1) Creating component namelists Calling /usr/local/components/cam//cime_config/buildnml CAM namelist copy: file1 /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/FKESSLER/Buildconf/camconf/atm_in file2 /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/run/atm_in Calling /usr/local/cime/src/components/stub_comps/slnd/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/sice/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/socn/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/srof/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/sglc/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/swav/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/sesp/cime_config/buildnml Calling /usr/local/cime/src/drivers/mct/cime_config/buildnml Finished creating component namelists Checking that inputdata is available as part of case submission Setting resource.RLIMIT_STACK to -1 from (-1, -1) Loading input file list: 'Buildconf/cam.input_data_list' Loading input file list: 'Buildconf/cpl.input_data_list' Check case OK submit_jobs case.run Submit job case.run Starting job script case.run Setting resource.RLIMIT_STACK to -1 from (-1, -1) Generating namelists for /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/FKESSLER Creating component namelists Calling /usr/local/components/cam//cime_config/buildnml CAM namelist copy: file1 /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/FKESSLER/Buildconf/camconf/atm_in file2 /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/run/atm_in Calling /usr/local/cime/src/components/stub_comps/slnd/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/sice/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/socn/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/srof/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/sglc/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/swav/cime_config/buildnml Calling /usr/local/cime/src/components/stub_comps/sesp/cime_config/buildnml Calling /usr/local/cime/src/drivers/mct/cime_config/buildnml Finished creating component namelists ------------------------------------------------------------------------- - Prestage required restarts into /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/run - Case input data directory (DIN_LOC_ROOT) is /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/inputdata - Checking for required input datasets in DIN_LOC_ROOT ------------------------------------------------------------------------- 2021-06-10 09:16:12 MODEL EXECUTION BEGINS HERE run command is mpiexec -np 4 /opt/uio/tmp/tmp92gxhvfo/job_working_directory/000/2/working/work/FKESSLER/bld/cesm.exe >> cesm.log.$LID 2>&1 2021-06-10 09:25:10 MODEL EXECUTION HAS FINISHED check for resubmit dout_s False mach galaxy resubmit_num 0 ERROR: No result from jobs [('case.run', None)]