Mercurial > repos > climate > eodie
comparison postprocess_csv.sh @ 0:81b0ca76435d draft default tip
"planemo upload for repository https://gitlab.com/eetun-tiimi/EODIE commit c4a5672398bc878dd2bc0bf4f3a26f59b3f6395c"
| author | climate |
|---|---|
| date | Thu, 30 Dec 2021 15:24:09 +0000 |
| parents | |
| children |
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| -1:000000000000 | 0:81b0ca76435d |
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| 1 #!/usr/bin/env bash | |
| 2 | |
| 3 WORKDIR=$1 | |
| 4 RESDIR=$2 | |
| 5 | |
| 6 echo "====================================================================" | |
| 7 echo " Convert EODIE csv to tabular " | |
| 8 echo "====================================================================" | |
| 9 | |
| 10 nb_csv=$(find $WORKDIR -type f -name "*.csv" | wc -l) | |
| 11 echo "Number of csv file to convert: $nb_csv" | |
| 12 if [[ $nb_csv -gt 0 ]]; then | |
| 13 echo "Start" | |
| 14 for infile in $WORKDIR/*.csv; do | |
| 15 echo "processing $infile" | |
| 16 sed -i.bak -e "s/,/\t/g" $infile | |
| 17 mv $infile $RESDIR/. | |
| 18 done | |
| 19 fi | |
| 20 | |
| 21 echo "EODIE Tabular saved." |