Mercurial > repos > computational-metabolomics > dimspy_align_samples

comparison align_samples.xml @ 1:c72868b80c29 draft

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"planemo upload for repository https://github.com/computational-metabolomics/dimspy-galaxy commit 680116d0cf6a6d7246cba655452dea43269aeba4"
author computational-metabolomics
date Tue, 28 Apr 2020 17:44:59 -0400
parents 33b65dacd377
children 7b6f148bd99f
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0:33b65dacd377 1:c72868b80c29
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90 Standard DIMS processing workflow: Process Scans -> Replicate Filter -> **Align Samples** -> [Missing values sample filter] -> Blank Filter -> Sample Filter -> Matrix processing -> Statistics 90 Standard DIMS processing workflow: Process Scans -> [Replicate Filter] -> **Align Samples** -> Blank Filter -> Sample Filter -> [Missing values sample filter] -> Pre-processing -> Statistics
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94 This tool takes the peaklists for all study samples and merges them in to single aligned peak matrix. The peak matrix comprises a table, with samples along one axis and the mass-to-charge ratios of detected mass spectral peaks along the opposite axis. At the intersection of sample and mass-to-charge ratio, the intensity is given for a specific peak in a specific sample (if no intensity recorded, then ‘0’ is inserted). 94 This tool takes the peaklists for all study samples and merges them in to single aligned peak matrix. The peak matrix comprises a table, with samples along one axis and the mass-to-charge ratios of detected mass spectral peaks along the opposite axis. At the intersection of sample and mass-to-charge ratio, the intensity is given for a specific peak in a specific sample (if no intensity recorded, then ‘0’ is inserted).
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