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"planemo upload for repository https://github.com/computational-metabolomics/dimspy-galaxy commit 6321871098b2c4bc9e321d20b7e66fff3d641839"
author computational-metabolomics
date Sat, 11 Apr 2020 16:49:37 -0400
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1 Galaxy tool wrappers for DIMSpy
2 ========================
3 |Build Status (Travis)| |Git| |Bioconda| |License|
4
5 Galaxy tool wrappers for Python package DIMSpy: data processing of direct-infusion mass spectrometry (DIMS)-based metabolomics and lipidomics data
6
7 Source code: https://github.com/computational-metabolomics/dimspy
8
9 PyPI (The Python Package Index): https://pypi.org/project/dimspy
10
11
12 Version
13 --------
14 v1.4.0+Galaxy0 (`DIMSpy v1.4.0 <https://pypi.org/project/dimspy/1.4.0/>`_)
15
16
17 Galaxy
18 -------
19 `Galaxy <https://galaxyproject.org>`_ is an open, web-based platform for data intensive biomedical research. Whether on the free public server or your own instance, you can perform, reproduce, and share complete analyses.
20
21
22 Authors, contributors & Contacts
23 ----------------------------------
24 - Ralf J. M. Weber (r.j.weber@bham.ac.uk) - `University of Birmingham (UK) <http://www.birmingham.ac.uk/index.aspx>`_
25 - Thomas N. Lawson (tnl495@bham.ac.uk) - `University of Birmingham (UK) <http://www.birmingham.ac.uk/index.aspx>`_
26 - Martin R. Jones (m.r.jones.1@bham.ac.uk) - `University of Birmingham (UK) <http://www.birmingham.ac.uk/index.aspx>`_
27
28
29 Bugs
30 ----
31 Please report any bugs that you find `here <https://github.com/computational-metabolomics/dimspy-galaxy/issues>`_.
32 Or fork the repository on `GitHub <https://github.com/computational-metabolomics/dimspy-galaxy/>`_
33 and create a pull request (PR). We welcome all contributions, and we
34 will help you to make the PR if you are new to `git`.
35
36
37 Changes
38 -------
39 v1.4.0+galaxy0
40 - First stable release
41 - Final release (Python 2-based version `DIMSpy <https://pypi.org/project/dimspy/1.4.0/>`_)
42
43
44 Licenses
45 -------
46 DIMSpy and Galaxy tools are released under the GNU General Public License v3.0 (see `LICENSE file <https://github.com/computational-metabolomics/dimspy-galaxy/blob/master/LICENSE>`_)
47
48 **Third-party licenses and copyright**
49
50 RawFileReader reading tool. Copyright © 2016 by Thermo Fisher Scientific, Inc. All rights reserved. See `RawFileReaderLicense <https://github.com/computational-metabolomics/dimspy/blob/master/RawFileReaderLicense.rst>`_ for licensing information.
51 Using DIMSpy software for processing Thermo Fisher Scientific *.raw files implies the acceptance of the RawFileReader license terms.
52 Anyone receiving RawFileReader as part of a larger software distribution (in the current context, as part of DIMSpy) is considered an "end user" under
53 section 3.3 of the RawFileReader License, and is not granted rights to redistribute RawFileReader.
54
55
56 .. |Build Status (Travis)| image:: https://img.shields.io/travis/computational-metabolomics/dimspy-galaxy.svg?style=flat&maxAge=3600&label=Travis-CI
57 :target: https://travis-ci.com/computational-metabolomics/dimspy-galaxy
58
59 .. |Git| image:: https://img.shields.io/badge/repository-GitHub-blue.svg?style=flat&maxAge=3600
60 :target: https://github.com/computational-metabolomics/dimspy
61
62 .. |Bioconda| image:: https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat&maxAge=3600
63 :target: http://bioconda.github.io/recipes/dimspy/README.html
64
65 .. |License| image:: https://img.shields.io/badge/License-GPL%20v3-blue.svg
66 :target: https://www.gnu.org/licenses/gpl-3.0.html