Mercurial > repos > computational-metabolomics > mspurity_createdatabase

comparison spectralMatching.R @ 4:3d36a391612c draft

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"planemo upload for repository https://github.com/computational-metabolomics/mspurity-galaxy commit cbbd708ea1e93b1b1643f6bf6da72af65ffd9950"
author computational-metabolomics
date Mon, 10 Aug 2020 08:41:22 -0400
parents f52287a06c02
children 2f71b3495221
comparison
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3:19fd19059791 4:3d36a391612c
290 } 290 }
291 291
292 q_check <- checkSPeakMeta(opt$q_dbPth, 'query') 292 q_check <- checkSPeakMeta(opt$q_dbPth, 'query')
293 l_check <- checkSPeakMeta(opt$l_dbPth, 'library') 293 l_check <- checkSPeakMeta(opt$l_dbPth, 'library')
294 294
295
295 if (q_check && l_check){ 296 if (q_check && l_check){
296 sm <- msPurity::spectralMatching( 297 sm <- msPurity::spectralMatching(
297 q_purity = opt$q_purity, 298 q_purity = opt$q_purity,
298 l_purity = opt$l_purity, 299 l_purity = opt$l_purity,
299 300