Mercurial > repos > cpt > cpt_compare_gbk
comparison cpt_gbk_compare/test-data/related.1-2000.gbk @ 0:fc603e665d75 draft default tip
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author | cpt |
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date | Tue, 21 Jun 2022 19:46:32 +0000 |
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-1:000000000000 | 0:fc603e665d75 |
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1 LOCUS CbK 2000 bp DNA linear UNK 09-APR-2012 | |
2 DEFINITION Bacteriophage phiCbK. | |
3 ACCESSION CbK | |
4 VERSION CbK | |
5 KEYWORDS . | |
6 SOURCE . | |
7 ORGANISM . | |
8 . | |
9 FEATURES Location/Qualifiers | |
10 source 1..2000 | |
11 /note="Source genome originally 215710 bp" | |
12 /note="Cut from 1 to 2000" | |
13 CDS 1002..1193 | |
14 /codon_start=1 | |
15 /product="hypothetical conserved protein" | |
16 /gene="CbK_gp001" | |
17 /translation="MAEFLALIPNLAPFLAWGILLWIAAEVVWSVCLWVYGLRTLFKLH | |
18 RDDLAEAISFERALSPFD" | |
19 /transl_table=11 | |
20 CDS 1277..1540 | |
21 /codon_start=1 | |
22 /product="hypothetical conserved protein" | |
23 /gene="CbK_gp002" | |
24 /translation="MTIRHYLHDLAVRFVVLGWIFAKKPRKTAPKGQNFQPHPPALVDW | |
25 DHRWLYLAAGTGLTAVWLCFRFVGPSQDPSTAPPPSHRPWAS" | |
26 /transl_table=11 | |
27 CDS 1586..1690 | |
28 /codon_start=1 | |
29 /product="hypothetical conserved protein" | |
30 /gene="CbK_gp003" | |
31 /translation="MFAFLRRLSLAAVHGVLWAILLAMLALGGPRRAP" | |
32 /transl_table=11 | |
33 terminator 1745..1774 | |
34 /note="Predicted Rho-independent terminator" | |
35 ORIGIN | |
36 1 gggctctggg cgaagttttg tgggactact atgacttgca ttatttcaag cgcaagcggt | |
37 61 ccgagtggaa gtaccaaaga tttgctttgg tttatcaaca acttgccgac gcggcctcgg | |
38 121 acacctccat cgcgtccaag tttcagacct acgatcacct gccccacctg gagccgaagg | |
39 181 tgctcaaggc ccggcttgac gcgggtcacg ccgacgagcg cgggcggccg attccggacc | |
40 241 gcaaggagca cttccggcgg gtggtggtca gcgtcgactc ggccaacaag cccggcgccc | |
41 301 gcaacgacta cagcgtcgcc caggtctggg gggagaccca cgcccgcaag cactacctga | |
42 361 tctaccagga gcgcaagaag gtcgacatca ccggcctgac cgagatgatc gagcgggtgg | |
43 421 ccaagcgcta cgaggtcgac gccatcctgg tcgaagacaa gggcaacggc accgcctaca | |
44 481 tccaggcgcg gggccagacc gacagccagc ggcggctcgc cccggccccg atcgaggcga | |
45 541 tccaggtccc gagcacctat tccaaggagt tccgcttcaa cgagatcgtc ccgatgatcg | |
46 601 aggccggcga ggtcttcctg ccgggcaagg ccccgtggct cgacctgctg atccgcgaaa | |
47 661 tcggtcagtt ccccgaaggc gcccatgacg accaagtcga cgccatgacg cagtacctcc | |
48 721 gctgggccaa gtccaagcgc acgcggttcg gcgcgcgcaa ggtcggctcg atgggctgac | |
49 781 gaggcccgtt aaccacgttt gttaacctcc gccggggcct taaccctaac acggcgaggg | |
50 841 ttaacaggtc cagggaccct tcgaaattaa cctttcgggg accctgggaa atcgtaaggc | |
51 901 ggggaccctg gccattttcc ggctggggac cctggcaaat tcatcgccgg ggaccctccg | |
52 961 aaattcatcc tcggggaccc tggcaaatca aggagccggc gatggccgaa tttctcgccc | |
53 1021 tgatccccaa cctcgcgccg ttcctggcct ggggaatcct cctctggatc gccgccgagg | |
54 1081 tggtctggag cgtctgcctc tgggtctatg gcctgcggac cctgttcaag ctgcaccgcg | |
55 1141 acgatctggc cgaggcgatc agcttcgagc gggcgctcag ccccttcgac taggcgcggc | |
56 1201 ctgccgacct aagtcacaga ctgtaggttt cgtgacaagg taggatattt cacaacgatt | |
57 1261 tcaagggctt atacctatga cgatccgaca ctacctccac gatctggccg tccgtttcgt | |
58 1321 cgttttgggg tggatttttg ccaaaaagcc ccgaaaaacc gctccaaaag ggcaaaattt | |
59 1381 tcagccccat ccgccggccc tggtcgactg ggaccaccgc tggctctatc tggcggccgg | |
60 1441 tactgggctg acggcggtct ggctctgctt cagattcgtt ggtccaagtc aagacccctc | |
61 1501 gaccgccccg ccgccaagtc atagaccgtg ggcttcgtga ccagatcacg cttccgttac | |
62 1561 cgctccagcc cttgtgaggc ctcggatgtt cgcctttctc cgccggctca gcctcgccgc | |
63 1621 cgtccatggc gtgctctggg cgatcctcct ggcgatgctc gccctgggcg gcccgcgccg | |
64 1681 cgcgccctaa agcgtcatat ctgacgccta aagccctcta agggctcatc tgtgagacat | |
65 1741 tcaacgccct cgtgttcctc tgaacgcggg ggcgttttga cgtccgagcg ttttgacgcg | |
66 1801 ggcgcatttt cgacttgacg cgcgagcgtt ttgacgcggg cgcatttttg attcgacggg | |
67 1861 cgagcgtttt gacgtccgag cgtttttcaa cttgacgtcg tttcatttac cgcgagcgcc | |
68 1921 ttagggttaa cgccggccgc cgagccctgg ggcgatttac caccaccgcg ttaacctaac | |
69 1981 gcctgttaac ctatcggttg | |
70 // | |
71 LOCUS Colossus 2000 bp DNA linear UNK 27-APR-2012 | |
72 DEFINITION Phage Colossus. | |
73 ACCESSION Colossus | |
74 VERSION Colossus | |
75 KEYWORDS . | |
76 SOURCE . | |
77 ORGANISM . | |
78 . | |
79 FEATURES Location/Qualifiers | |
80 source 1..2000 | |
81 /note="Source genome originally 279967 bp" | |
82 /note="Cut from 1 to 2000" | |
83 ORIGIN | |
84 1 ggccccgacc ccgagcgctc atctacattt ggtgccaatt tcgacatcac cccatagatg | |
85 61 tggggcaaat ctcgggctct agacacctgg gattctgcgg ggcgcgttaa ccatgtttgt | |
86 121 ttacgttact gcgcgcccga ccggtaaccc taattcgtag tcttaaaatc cccgagttta | |
87 181 cctggagtat ggcccagcac tacccggtca gactgctccg gtatggctgc gagatcagcg | |
88 241 cgtcgacagc ctcctcgacc tgtctgcgcg ctgacagccg ccggcgcctg ccctcaaacc | |
89 301 tacggacctc cgtcaccaaa cctacggagt ccgccgatcg aggtccgcag gttggggacc | |
90 361 cttcaaaatt caccctgggg acccttcgaa attcatgggc cagggaccct ggaaatttta | |
91 421 ccgggggacc cttcgaaatt ctgcctccgg ggaccctggg aaattctgga gccagggacc | |
92 481 ctggaaaatt cacccagatt tccggcccga atcgcctccc atttaagccc aaccctcaga | |
93 541 tcggcagaaa tatcggcgat tttaccccat tttgggccta aaatccctta aaaatcagcc | |
94 601 ttttagctcc atttcaacat cggcagcgcc cgctccgcgc cctgcctgac tgtagtcatc | |
95 661 cttcaacgca aatgtgactc accgacctgt cgccacaatt cctcccatct tttcaacatg | |
96 721 ttacagagtc acatctcaaa tccggccacg cccagcccga tccggtcatc cggccagacc | |
97 781 ttaatccgga catatccgga cagagcccca tcccagaaac ctcaatgaaa tcaacacgac | |
98 841 caccttgcca aacgtgacta tccggacata tccggccacg caaacgtgac tctcaccata | |
99 901 ttgctgcacc gcaacataat cccagcccgt acaacccatt tcggttgtat ttcgacctca | |
100 961 caaccgattt tggttgtatc ggcccagaca catccctcct ctcctgtcaa tcccacctac | |
101 1021 ctgcgacctc ctcgcagtcc tgaattggca gaaacgagac tgtgtcgccg gcgccgcgcc | |
102 1081 cctgcgttat cgtgccacgc ttgccagccc gccaggatcg tgccctactg tctctcggga | |
103 1141 gccggtctcc ctggcctgca cgtcgtagac gctagtcggt accccctcac ccagcccgag | |
104 1201 ggcattccag acgctagtcc gccgctcgca ggcggcttcg atcgctctct cccaaggcga | |
105 1261 tcgaggtcag gccggctcct atcccacctc caggagccca aaacagggtc aggagcccgg | |
106 1321 attagcccga ttctgggcta aaaacgcctc aaatcggccg aaaaacacga caaaacgcca | |
107 1381 tttcattcgc aaaactcgac gcgattccat taatttgacg cgacgccatt ccatttcgcc | |
108 1441 gactcgacat gacgcgattc cattccggcg actcgacatg acgccatttc attttcttga | |
109 1501 cgcgacgcca ttccatcccg ccggctccag accaccgccc aggtcgatta gggtaaacgt | |
110 1561 caggcccgtt aaccacgttc gttagggtta ccggtccagg taaggttacg aattagggta | |
111 1621 aacagggcgt tagggttaat gccccgttag ggttaacacc gcgatgcaca ctaacactac | |
112 1681 tactgttagg gttaacgcca ctgttagggt tacgaattag ggttaacgcg cccggccggt | |
113 1741 attactcggc actacccggt aatacctaat ggccattagg gttaacgccc tgcgagcgcg | |
114 1801 cagccccgcc gttgcgcccc tacggttcga agagcccggc ccctgccggg tcccgcccgg | |
115 1861 ctacatctac accttagcct ctatttctta acaaaccgta aacgccgggc agtttcccgc | |
116 1921 ccggcgccgg cttagtcgtc agattgcgcg gctaggccat aatcgcagtc atcccacaac | |
117 1981 caagagagga tgtaatccgg | |
118 // | |
119 LOCUS Karma 2000 bp DNA UNK 01-JAN-1980 | |
120 DEFINITION Phage Karma. | |
121 ACCESSION Karma | |
122 VERSION Karma | |
123 KEYWORDS . | |
124 SOURCE . | |
125 ORGANISM . | |
126 . | |
127 FEATURES Location/Qualifiers | |
128 source 1..2000 | |
129 /note="Source genome originally 221828 bp" | |
130 /note="Cut from 1 to 2000" | |
131 CDS 1002..1193 | |
132 /product="hypothetical conserved protein" | |
133 /locus_tag="Karma_gp001" | |
134 /codon_start=1 | |
135 /translation="MAEFLALIPNLAPFLVWGILLWIAAEVVWSVCLWVYGLRTLFKLH | |
136 RDDLAEAISFERALSPFD" | |
137 /transl_table=11 | |
138 CDS 1277..1525 | |
139 /product="hypothetical conserved protein" | |
140 /locus_tag="Karma_gp002" | |
141 /codon_start=1 | |
142 /translation="MSIRTFFHDLAVRFVVLGWIFARKPLKWAPKGHNFQPKPPVQVGA | |
143 LAAGSLLALSLALGGLWFRFTFPDKSQVVSRRPQAMS" | |
144 /transl_table=11 | |
145 CDS 1587..1691 | |
146 /product="hypothetical conserved protein" | |
147 /locus_tag="Karma_gp003" | |
148 /codon_start=1 | |
149 /translation="MFAFLRRLSLAAVHGVLWAILLAMLALGGPRRPL" | |
150 /transl_table=11 | |
151 terminator 1746..1775 | |
152 /note="predicted rho-independent terminator" | |
153 ORIGIN | |
154 1 gggctctggg cgaagttttg tgggactact atgacttgca ttatttcaag cgcaagcggt | |
155 61 ccgagtggaa gtaccaaaga tttgctttgg tttatcaaca acttgccgac gcggcctcgg | |
156 121 acacctccat cgcgtccaag tttcagacct acgatcacct gccccacctg gagccgaagg | |
157 181 tgctcaaggc ccggcttgac gcgggtcacg ccgacgagcg cgggcggccg attccggacc | |
158 241 gcaaggagca cttccggcgg gtggtggtca gcgtcgactc ggccaacaag cccggcgccc | |
159 301 gcaacgacta cagcgtcgcc caggtctggg gggagaccca cgcccgcaag cactacctga | |
160 361 tctaccagga gcgcaagaag gtcgacatca ccggcctgac cgagatgatc gagcgggtgg | |
161 421 ccaagcgcta cgaggtcgac gccatcctgg tcgaagacaa gggcaacggc accgcctaca | |
162 481 tccaggcgcg gggccagacc gacagccagc ggcggctcgc cccggccccg atcgaggcga | |
163 541 tccaggtccc gagcacctat tccaaggagt tccgcttcaa cgagatcgtc ccgatgatcg | |
164 601 aggccggcga ggtcttcctg ccgggcaagg ccccgtggct cgacctgctg atccgcgaaa | |
165 661 tcggtcagtt ccccgaaggc gcccatgacg accaagtcga cgccatgacg cagtacctcc | |
166 721 gctgggccaa gtccaagcgc acgcggttcg gcgcgcgcaa ggtcggctcg atgggctgac | |
167 781 gaggcccgtt aaccacgttt gttaacctcc gccggggcct taaccctaac acggcgaggg | |
168 841 ttaacaggtc cagggaccct tcgaaattaa cctttcgggg accctgggaa atcgtaaggc | |
169 901 agggaccctg gccattttcc ggctggggac cctggcaaat tcaccgccgg ggaccctccg | |
170 961 aaattcatcc tcggggaccc tggcaaatca aggagccggc gatggccgaa tttctcgccc | |
171 1021 tgatccccaa cctcgcgccg ttcctggtct ggggaatcct cctctggatc gccgccgagg | |
172 1081 tggtctggag cgtctgcctc tgggtctatg gcctgcggac cctgttcaag ttgcaccgcg | |
173 1141 atgatctggc cgaggcgatc agcttcgagc gggccttgag ccccttcgac taggcgcggc | |
174 1201 ctgccgacct aagtcacgga ctgtaggttt cgtgacaagg tgagatattc cacaacgatt | |
175 1261 tcaaaggctt actgcgatgt cgatccgcac gttcttccac gatctggccg tccgtttcgt | |
176 1321 cgttttgggg tggatttttg cccgaaaacc gctgaaatgg gctccaaaag ggcataattt | |
177 1381 tcagcctaaa ccgccggtcc aggtcggcgc cctggcggcc ggctcgctcc tcgccctcag | |
178 1441 tctggcgctc ggcgggctct ggttccgctt cacgtttccg gacaaaagtc aagtggtctc | |
179 1501 gcgccggccg caggctatgt catagaccgt gggcttcgtg accagatcac gcttccgtta | |
180 1561 ccgctccagc ccttgtgagg cctcggatgt tcgcctttct ccgccggctc agcctcgccg | |
181 1621 ccgtccatgg cgtgctctgg gcgatcctcc tggcgatgct cgccctgggc gggccgcgcc | |
182 1681 gcccgctcta aagcgtcata tctgacgcct aaggccccct aaggcctcat ctgtgagaca | |
183 1741 ttcaacgccc tcgtgttcct ctgaacgcgg gggcgttttg acgtcggcgc atttttgact | |
184 1801 tgacgcgcga gcgttttgac gcgggcgcat ttttgattcg acgggcgagc gttttgacgt | |
185 1861 ccgagcattt ttcaacttga cgtcgttcca tttaccggga gcgccttagg gttaacgccg | |
186 1921 gccgccgagc cctggggcga tttaccaccg ccacgttaac ctaacgcctg ttaacctatc | |
187 1981 ggttgttaag gttaacgccc | |
188 // | |
189 LOCUS Magneto 2000 bp DNA UNK 01-JAN-1980 | |
190 DEFINITION Bacteriophage Magneto. | |
191 ACCESSION Magneto | |
192 VERSION Magneto | |
193 KEYWORDS . | |
194 SOURCE . | |
195 ORGANISM . | |
196 . | |
197 FEATURES Location/Qualifiers | |
198 source 1..2000 | |
199 /note="Source genome originally 218929 bp" | |
200 /note="Cut from 1 to 2000" | |
201 CDS 1014..1217 | |
202 /product="hypothetical conserved protein" | |
203 /locus_tag="Magneto_gp001" | |
204 /codon_start=1 | |
205 /translation="MEPTMAGFLNLIPNLAPFALWGILLWIAAEVVWSVCLWVYGLRTL | |
206 FKLHRDDVAEALTLERALAPFD" | |
207 /transl_table=11 | |
208 CDS 1287..1535 | |
209 /product="hypothetical conserved protein" | |
210 /locus_tag="Magneto_gp002" | |
211 /codon_start=1 | |
212 /translation="MSIRTFFHDLAVRFVVLGWIFARKPLKWAPKGHNFQPKPPVQVGA | |
213 LAAGSLLALSLALGGLWFRFTFPDKSQVVSRRPQAMS" | |
214 /transl_table=11 | |
215 CDS 1597..1701 | |
216 /product="hypothetical conserved protein" | |
217 /locus_tag="Magneto_gp003" | |
218 /codon_start=1 | |
219 /translation="MFAFLRRLSLAAVHGVLWAILLAMYAVGGPRRAP" | |
220 /transl_table=11 | |
221 ORIGIN | |
222 1 gcgccctggg cgaagttttg tgggactact atgacttgca ttatttcaag cgcaagcggt | |
223 61 ccgagtggaa gtaccaaaga tttgctttgg tttatcaaca acttgccgac gcggcctcgg | |
224 121 acacctccat cgcgtccaag tttcagacct atgatcacct gccgcacctg gagccgaagg | |
225 181 tgctcaaggc ccggcttgac gcgggtcacg ccgacgagcg cgggcggccg attccggacc | |
226 241 gcaaggagca cttccggcgg gtggtggtca gcgtcgactc ggccaacaag cccggcgccc | |
227 301 gcaacgacta cagcgtcgcc caggtctggg gggagaccca cgcccgcaag cactacctga | |
228 361 tctaccagga gcgcaagaag gtcgacatca ccggcctgac cgagatgatc gagcgggtgg | |
229 421 ccaagcgcta cgaggtcgac gccatcctgg tcgaagacaa gggcaacggc accgcctaca | |
230 481 tccaggcgcg gggccagacc gacagccagc ggcggctcgc cccggccccg atcgaggcga | |
231 541 tccaggtccc gagcacctat tccaaggagt tccgcttcaa cgagatcgtc ccgatgatcg | |
232 601 aggccggcga ggtcttcctg ccgggcaagg ccccgtggct cgacctgctg atccgcgaaa | |
233 661 tcggtcagtt ccccgaaggc gcccatgacg accaagtcga cgccatgacg cagtacctcc | |
234 721 gctgggccaa gtccaagcgc acgcggtttg gcgcgcgcaa ggtcggctcg atgggctgac | |
235 781 gaggcccgtt aaccacgttt gttaacctcc gccggggcct taaccctaac acggcgaggg | |
236 841 ttaacaggcc agggaccctt cgaaattaac ctttcgggga ccctgggaaa tcgtaaggcg | |
237 901 gggaccctgg ccattttccg cctggggacc ctccaaaatt caccgtcggg gaccctggga | |
238 961 aattcatctt ccggggaccc tggcaaattc aaagccgggg accctggcga atcatggagc | |
239 1021 cgacgatggc cggatttctc aacctgatcc cgaacctcgc gccgttcgcg ctttggggaa | |
240 1081 tcctcctctg gatcgccgcc gaggtggtct ggagcgtctg cctctgggtc tatggcctgc | |
241 1141 gaaccctgtt caagctgcac cgtgacgatg tggccgaggc cctgaccctg gagcgggctc | |
242 1201 tggcgccgtt cgactgaccc aagtcacgga ctgtaggttt cgtgacaagg tgagatattc | |
243 1261 cacaacgatt tcaaaggctt actgcgatgt cgatccgcac gttcttccac gatctggccg | |
244 1321 tccgtttcgt cgttttgggg tggatttttg cccgaaaacc gctgaaatgg gctccaaaag | |
245 1381 ggcataattt tcagcccaaa ccgccggtcc aggtcggcgc cctggcggcc ggctcgctcc | |
246 1441 tcgccctcag tctggcgctc ggcgggctct ggttccgctt cacgtttccg gacaaaagtc | |
247 1501 aagtggtctc gcgccggccg caggctatgt catagaccgt gggcttcgtg accagatcac | |
248 1561 gcttccgtta ccgctccagc ccttgtgagg cctcggatgt tcgcctttct ccgccggctc | |
249 1621 agcctcgccg ccgtccatgg cgtgctctgg gcgatcctcc tggcgatgta cgccgtgggc | |
250 1681 gggccgcgcc gcgcgcccta aagcgccata tctgacgcct aaggccccct aaggcctcat | |
251 1741 ctgtgagaca ttcaacgccc tcgtgttcct ctgaacgcgg gggcgttttg acgtcggcgc | |
252 1801 atttttgact tgacgcgcga gcgttttgac gcgggcgcat tttcgattcg acgcgcgagc | |
253 1861 gttttgacgt ccgagcattt ttcaacttga cgtcgttcca tttaccggga gcgccttagg | |
254 1921 gttaacgccg gccgccgagc cctggggcga tttaccaccg ccacgttaac ctaacgcctg | |
255 1981 ttaacctatc ggttgttaag | |
256 // | |
257 LOCUS Rogue 2000 bp DNA UNK 01-JAN-1980 | |
258 DEFINITION Phage Rogue. | |
259 ACCESSION Rogue | |
260 VERSION Rogue | |
261 KEYWORDS . | |
262 SOURCE . | |
263 ORGANISM . | |
264 . | |
265 FEATURES Location/Qualifiers | |
266 source 1..2000 | |
267 /note="Source genome originally 223720 bp" | |
268 /note="Cut from 1 to 2000" | |
269 CDS 992..1225 | |
270 /product="hypothetical conserved protein" | |
271 /locus_tag="Rogue_gp001" | |
272 /codon_start=1 | |
273 /translation="MAELMSLLFNIAPFLLLAIVVYHVLEAVWAISLWVYGLRTLWKLH | |
274 RDDVSEALTLERALSPFSSPGRDRNGNPVPPA" | |
275 /transl_table=11 | |
276 CDS 1298..1546 | |
277 /product="hypothetical conserved protein" | |
278 /locus_tag="Rogue_gp002" | |
279 /codon_start=1 | |
280 /translation="MSIRTFFHDLAVRFVVLGWIFAQKPQKWAPKGHNFQPIPPAQVER | |
281 QDLRGRVLLLRSFGVLAAACTTMGLCQYLLWRRAPMS" | |
282 /transl_table=11 | |
283 CDS 1594..1692 | |
284 /product="hypothetical conserved protein" | |
285 /locus_tag="Rogue_gp003" | |
286 /codon_start=1 | |
287 /translation="MPHLGFWLSAACIALAWAIWALRRLIAPPPPA" | |
288 /transl_table=11 | |
289 ORIGIN | |
290 1 gcgctctggg cgaagttttg tgggactact atgacttgca ttacttcaaa cggaagcgct | |
291 61 ccgagtggaa gtaccaaaga tttgctttgg tttatcaaca acttgcggac gccgcctcgg | |
292 121 acacgtcgat cgcgtccaag ttccagacct accagcacct gccgcacctg gacccgaagg | |
293 181 tcctcaaggc gcgcatggac gcggggcatg ttgacgatcg cggccggccg atcccggacc | |
294 241 gcaaggagca cttccgccgc atcgtgacct cggtcgacgc ggcccagaaa aagggcgcgc | |
295 301 gcaacgacta cacggtcgtc caggtgtggg gcgagaccca cgatcgcaag cactacctga | |
296 361 tctaccagga gcgcaagaag gtcgagatca acgacctgat cgagatggtc gagcgcatct | |
297 421 ccaagcgctt cgacgtcgac tctatcctgg tcgaggacaa gggcaacggc accgcctaca | |
298 481 tccaggcgcg gggccagacc gacagccagc gccggctcgc gccggccccg atcgaggcga | |
299 541 tccaggtccc cagcacctac tccaaggagt tccgcttcaa cgaggtcatc ccgatgatcg | |
300 601 aggcgcaaga ggtctacctg cccgacaagg cgccgtggct ggacctgttc atccgcgaag | |
301 661 tcgggcagtt ccccgaaggc gcccacgatg accaagtcga cgccatgacg cagtacctcc | |
302 721 gctgggccaa gtccaagcgc tcgcggttcg gcgcgcgcaa ggtcggctcg atgggctgat | |
303 781 taaccatctt cgttcaccct gtccgggcct gttaacctta acacaccgat ggttaacagg | |
304 841 ccagggaccc atcgaaatta acccttgggg acccagggga atcgtcagcc ggggaccctg | |
305 901 ggaaattaac ccttggggac ccaccaaaat caaccttcgg ggaccctagc gaatcgtggc | |
306 961 tcggggaccc tggcaaatca aggagccggc gatggccgaa ctcatgagcc tgctgttcaa | |
307 1021 catcgccccg ttcctgctgc tggcgatcgt cgtctaccac gtcctggagg ccgtctgggc | |
308 1081 gatcagcctg tgggtctacg gcctgcgcac cctgtggaag ctccaccgcg acgacgtcag | |
309 1141 cgaggccctg accctggagc gggccttgag ccccttctcc agccctggcc gcgaccgcaa | |
310 1201 cggcaatccc gtcccgccgg cctgacgacc tatgtcacgg actgtaggtt tcatgacaag | |
311 1261 gtggattatt ccacaacgaa atcaaaggct tatcgccatg tcgatccgca ccttcttcca | |
312 1321 cgacctcgcc gtccgtttcg tcgttttggg gtggattttt gcccaaaaac cccagaaatg | |
313 1381 ggctccaaaa gggcataatt ttcagcccat cccgccggcc caggtcgagc ggcaggacct | |
314 1441 ccgggggcgc gtgcttctcc tgaggagctt cggcgtcctc gccgccgcat gcacaaccat | |
315 1501 gggcctgtgt caatacctgc tctggcgccg cgcgcccatg tcatagacca tcgctttcgt | |
316 1561 gacagcttca cgatcccgtt accggacaac cccatgcccc acctcggttt ctggctctcc | |
317 1621 gccgcctgca tcgccctggc ctgggcgatc tgggcgctac ggcggctgat cgccccacca | |
318 1681 ccgcccgcct gaccccggcc gcgcgcgccc gcgccgccgg tatcgcccgg ccaaagcgtc | |
319 1741 atatatgagc ccttaacccc tctaaggtcg catatatgag accttacggc cctcttgacg | |
320 1801 ccctcgtgtt cctctgaacg cgggggcgtt ttgacgtcgg cgcatttcca actcaacgcg | |
321 1861 cggccgtttt gacgtccgag cgttttgacg cgagcgcatt ttcgattcga cgggcgagcg | |
322 1921 ttttgacgtc cgaccgtttt tcaacttgac gtcgtttcat ttaccaagag cgccttaagg | |
323 1981 ttaaccgccg agcctgggaa | |
324 // | |
325 LOCUS Swift 2000 bp DNA UNK 01-JAN-1980 | |
326 DEFINITION Phage Swift. | |
327 ACCESSION Swift | |
328 VERSION Swift | |
329 KEYWORDS . | |
330 SOURCE . | |
331 ORGANISM . | |
332 . | |
333 FEATURES Location/Qualifiers | |
334 source 1..2000 | |
335 /note="Source genome originally 219216 bp" | |
336 /note="Cut from 1 to 2000" | |
337 CDS 1026..1217 | |
338 /product="hypothetical conserved protein" | |
339 /locus_tag="Swift_gp001" | |
340 /codon_start=1 | |
341 /translation="MAGFLNLIPNLAPFALWGVLLWIAAEVVWSVCLWVYGLRTLFKLH | |
342 RDDLAEAISFERALSPFD" | |
343 /transl_table=11 | |
344 CDS 1301..1549 | |
345 /product="hypothetical conserved protein" | |
346 /locus_tag="Swift_gp002" | |
347 /codon_start=1 | |
348 /translation="MSIRAFLHDLAVRFVVLGWIFAQKPQKWAPKGHNFQPIPPAQVER | |
349 QDLRGRVLLLRSFGVLAAACTTMGLCQYLLWRRAAMS" | |
350 /transl_table=11 | |
351 CDS 1597..1695 | |
352 /product="hypothetical conserved protein" | |
353 /locus_tag="Swift_gp003" | |
354 /codon_start=1 | |
355 /translation="MPHLGFWLSAACIALAWAIWALRRLIGPPPPT" | |
356 /transl_table=11 | |
357 ORIGIN | |
358 1 gggctctggg cgaagttttg tgggactact atgacttgca ttatttcaag cgcaagcggt | |
359 61 ccgagtggaa gtaccaaaga tttgctttgg tttatcaaca acttgccgac gcggcctcgg | |
360 121 acacctccat cgcgtccaag tttcagacct acgatcacct gccccacctg gagccgaagg | |
361 181 tgctcaaggc ccggcttgac gcgggtcacg ccgacgagcg cgggcggccg attccggacc | |
362 241 gcaaggagca cttccggcgg gtggtggtca gcgtcgactc ggccaacaag cccggcgccc | |
363 301 gcaacgacta cagcgtcgcc caggtctggg gggagaccca cgcccgcaag cactacctga | |
364 361 tctaccagga gcgcaagaag gtcgacatca ccggcctgac cgagatgatc gagcgggtgg | |
365 421 ccaagcgcta cgaggtcgac gccatcctgg tcgaagacaa gggcaacggc accgcctaca | |
366 481 tccaggctcg gggccagacc gacagccagc ggcggctcgc cccggccccg atcgaggcga | |
367 541 tccaggtccc gagcacctat tccaaggagt tccgcttcaa cgagatcgtc ccgatgatcg | |
368 601 aggccggcga ggtcttcctg ccgggcaagg ccccgtggct cgacctgctg atccgcgaaa | |
369 661 tcggtcagtt ccccgaaggc gcccatgacg accaagtcga cgccatgacg cagtacctcc | |
370 721 gctgggccaa gtccaagcgc acgcggttcg gcgcgcgcaa ggtcggctcg atgggctgac | |
371 781 gaggcccgtt aaccacgttt gttaacctcc gccggggcct taaccctaac acggcgaggg | |
372 841 ttaacaggtc cagggaccct tcgaaattaa cctttcgggg accctgggaa atcgacagac | |
373 901 ggggaccctg gccattttcc ggctggggac cctgccaaat tcatcgccgg ggaccctccg | |
374 961 aaattcatct ctggggaccc tggcgaattc agagccgggg accctggcga atcatggagc | |
375 1021 cgacgatggc cggatttctc aacctgatcc cgaacctcgc gccgttcgcg ctttggggcg | |
376 1081 tcctcctctg gatcgccgcc gaggtggtct ggagcgtctg cctctgggtc tacggcctgc | |
377 1141 ggaccctgtt caagctgcac cgcgacgatc tggccgaggc gatcagcttc gagcgggcct | |
378 1201 tgagcccctt cgactaggcg cggcctgccg acctaagtca cggactgtag gtttcatgac | |
379 1261 aaggtggatt attccacaac gaaatcaaag gcttatcgcc atgtcgatcc gcgcgttcct | |
380 1321 ccacgatctg gctgtccgct tcgtcgtttt ggggtggatt tttgctcaaa aaccccagaa | |
381 1381 atgggctcca aaagggcata attttcagcc catcccgccg gcccaggtcg agcggcagga | |
382 1441 cctccggggg cgcgtgctac tcctgaggag cttcggcgtc ctcgccgccg catgcacaac | |
383 1501 catgggcctg tgtcaatacc tgctctggcg ccgcgcggcc atgtcataga ctagggcttt | |
384 1561 cgtgacagct tcacgatccc gttaccggac aaccccatgc ctcacctggg tttctggctc | |
385 1621 tccgccgcct gcatcgctct ggcctgggcg atctgggcgc tgcggcggct gatcggccca | |
386 1681 ccaccgccca cctgataccg gcggcgcgag cccgcgccgc cggtatcgcc cggccaaagc | |
387 1741 atcatatatg agcccttaac ccctctaagg tctcatatat gcgaccttac ggccctcttg | |
388 1801 acgccctcgt gttcctctga acgcgggggc gttttgacgt cggcgcattt ccaactcaac | |
389 1861 gcgcggccgt tttgacgtcc gagcgttttg acgcgagcgc attttcgatt cgacgggcga | |
390 1921 gcgttttgac gtccgaacgt ttttcaactt gacgtcgttt catttaccac gagcgcctta | |
391 1981 aggttaaccg ccgagcctgg | |
392 // |