Mercurial > repos > cpt > cpt_find_spanins
comparison findSpanin.xml @ 5:46b252c89e9e draft
planemo upload commit 25fff8b3887beeb66c2d53e2a32f9af9f34e40b6
| author | cpt |
|---|---|
| date | Fri, 20 Sep 2024 04:19:02 +0000 |
| parents | 673d1776d3b9 |
| children | f8f045f436d8 |
comparison
equal
deleted
inserted
replaced
| 4:673d1776d3b9 | 5:46b252c89e9e |
|---|---|
| 2 <description>With the outputs from the ISP and OSP candidate tools, cull the list down to candidate pairs</description> | 2 <description>With the outputs from the ISP and OSP candidate tools, cull the list down to candidate pairs</description> |
| 3 <macros> | 3 <macros> |
| 4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 5 | 5 |
| 6 </macros> | 6 </macros> |
| 7 <expand macro="requirements"> | 7 <requirements> |
| 8 </expand> | 8 <requirement type="package" version="3.9">python</requirement> |
| 9 <requirement type="package" version="1.84">biopython</requirement> | |
| 10 <requirement type="package" version="2024.9.11">regex</requirement> | |
| 11 </requirements> | |
| 9 <command detect_errors="aggressive"><![CDATA[ | 12 <command detect_errors="aggressive"><![CDATA[ |
| 10 python '$__tool_directory__/findSpanin.py' | 13 python '$__tool_directory__/findSpanin.py' |
| 11 '$putative_isp_fasta_file' | 14 '$putative_isp_fasta_file' |
| 12 '$putative_osp_fasta_file' | 15 '$putative_osp_fasta_file' |
| 13 --max_isp_osp_distance '$max_isp_osp_distance' | 16 --max_isp_osp_distance '$max_isp_osp_distance' |