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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
author cpt
date Mon, 05 Jun 2023 02:42:28 +0000
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<macros>
    <xml name="gff_requirements">
        <requirements>
            <requirement type="package" version="2.7">python</requirement>
            <requirement type="package" version="1.65">biopython</requirement>
            <requirement type="package" version="2.12.1">requests</requirement>
			<requirement type="package" version="1.2.2">cpt_gffparser</requirement>
            <yield/>
        </requirements>
        <version_command>
		<![CDATA[
			cd '$__tool_directory__' && git rev-parse HEAD
		]]>
		</version_command>
    </xml>
    <xml name="citation/mijalisrasche">
        <citation type="doi">10.1371/journal.pcbi.1008214</citation>
        <citation type="bibtex">@unpublished{galaxyTools,
		author = {E. Mijalis, H. Rasche},
		title = {CPT Galaxy Tools},
		year = {2013-2017},
		note = {https://github.com/tamu-cpt/galaxy-tools/}
		}
		</citation>
    </xml>
    <xml name="citations">
        <citations>
            <citation type="doi">10.1371/journal.pcbi.1008214</citation>
            <citation type="bibtex">
			@unpublished{galaxyTools,
				author = {E. Mijalis, H. Rasche},
				title = {CPT Galaxy Tools},
				year = {2013-2017},
				note = {https://github.com/tamu-cpt/galaxy-tools/}
			}
			</citation>
            <yield/>
        </citations>
    </xml>
    <xml name="citations-crr">
        <citations>
            <citation type="doi">10.1371/journal.pcbi.1008214</citation>
            <citation type="bibtex">
			@unpublished{galaxyTools,
				author = {C. Ross},
				title = {CPT Galaxy Tools},
				year = {2020-},
				note = {https://github.com/tamu-cpt/galaxy-tools/}
			}
			</citation>
            <yield/>
        </citations>
    </xml>
    <xml name="citations-2020">
        <citations>
            <citation type="doi">10.1371/journal.pcbi.1008214</citation>
            <citation type="bibtex">
			@unpublished{galaxyTools,
				author = {E. Mijalis, H. Rasche},
				title = {CPT Galaxy Tools},
				year = {2013-2017},
				note = {https://github.com/tamu-cpt/galaxy-tools/}
			}
			</citation>
            <citation type="bibtex">
			@unpublished{galaxyTools,
				author = {A. Criscione},
				title = {CPT Galaxy Tools},
				year = {2019-2021},
				note = {https://github.com/tamu-cpt/galaxy-tools/}
			}
                        </citation>
            <yield/>
        </citations>
    </xml>
    <xml name="citations-2020-AJC-solo">
        <citations>
            <citation type="doi">10.1371/journal.pcbi.1008214</citation>
            <citation type="bibtex">
			@unpublished{galaxyTools,
				author = {A. Criscione},
				title = {CPT Galaxy Tools},
				year = {2019-2021},
				note = {https://github.com/tamu-cpt/galaxy-tools/}
			}
                        </citation>
            <yield/>
        </citations>
    </xml>
    <xml name="citations-clm">
        <citations>
            <citation type="doi">10.1371/journal.pcbi.1008214</citation>
            <citation type="bibtex">
			@unpublished{galaxyTools,
				author = {C. Maughmer},
				title = {CPT Galaxy Tools},
				year = {2017-2020},
				note = {https://github.com/tamu-cpt/galaxy-tools/}
			}
			</citation>
            <yield/>
        </citations>
    </xml>
    <xml name="sl-citations-clm">
        <citation type="bibtex">
			@unpublished{galaxyTools,
				author = {C. Maughmer},
				title = {CPT Galaxy Tools},
				year = {2017-2020},
				note = {https://github.com/tamu-cpt/galaxy-tools/}
			}
			</citation>
        <yield/>
    </xml>
</macros>