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annotate test-data/related.1-2000.gbk @ 2:b0ab633db780 draft default tip

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planemo upload commit f33bdf952d796c5d7a240b132af3c4cbd102decc
author cpt
date Fri, 05 Jan 2024 05:51:32 +0000
parents 1909729a1fd3
children
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1
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1 LOCUS CbK 2000 bp DNA linear UNK 09-APR-2012
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2 DEFINITION Bacteriophage phiCbK.
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3 ACCESSION CbK
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4 VERSION CbK
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5 KEYWORDS .
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6 SOURCE .
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7 ORGANISM .
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8 .
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9 FEATURES Location/Qualifiers
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10 source 1..2000
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11 /note="Source genome originally 215710 bp"
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12 /note="Cut from 1 to 2000"
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13 CDS 1002..1193
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14 /codon_start=1
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15 /product="hypothetical conserved protein"
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16 /gene="CbK_gp001"
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17 /translation="MAEFLALIPNLAPFLAWGILLWIAAEVVWSVCLWVYGLRTLFKLH
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18 RDDLAEAISFERALSPFD"
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19 /transl_table=11
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20 CDS 1277..1540
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21 /codon_start=1
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22 /product="hypothetical conserved protein"
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23 /gene="CbK_gp002"
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24 /translation="MTIRHYLHDLAVRFVVLGWIFAKKPRKTAPKGQNFQPHPPALVDW
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25 DHRWLYLAAGTGLTAVWLCFRFVGPSQDPSTAPPPSHRPWAS"
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26 /transl_table=11
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27 CDS 1586..1690
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28 /codon_start=1
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29 /product="hypothetical conserved protein"
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30 /gene="CbK_gp003"
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31 /translation="MFAFLRRLSLAAVHGVLWAILLAMLALGGPRRAP"
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32 /transl_table=11
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33 terminator 1745..1774
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34 /note="Predicted Rho-independent terminator"
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35 ORIGIN
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36 1 gggctctggg cgaagttttg tgggactact atgacttgca ttatttcaag cgcaagcggt
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37 61 ccgagtggaa gtaccaaaga tttgctttgg tttatcaaca acttgccgac gcggcctcgg
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38 121 acacctccat cgcgtccaag tttcagacct acgatcacct gccccacctg gagccgaagg
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39 181 tgctcaaggc ccggcttgac gcgggtcacg ccgacgagcg cgggcggccg attccggacc
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40 241 gcaaggagca cttccggcgg gtggtggtca gcgtcgactc ggccaacaag cccggcgccc
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41 301 gcaacgacta cagcgtcgcc caggtctggg gggagaccca cgcccgcaag cactacctga
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42 361 tctaccagga gcgcaagaag gtcgacatca ccggcctgac cgagatgatc gagcgggtgg
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43 421 ccaagcgcta cgaggtcgac gccatcctgg tcgaagacaa gggcaacggc accgcctaca
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44 481 tccaggcgcg gggccagacc gacagccagc ggcggctcgc cccggccccg atcgaggcga
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45 541 tccaggtccc gagcacctat tccaaggagt tccgcttcaa cgagatcgtc ccgatgatcg
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46 601 aggccggcga ggtcttcctg ccgggcaagg ccccgtggct cgacctgctg atccgcgaaa
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47 661 tcggtcagtt ccccgaaggc gcccatgacg accaagtcga cgccatgacg cagtacctcc
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48 721 gctgggccaa gtccaagcgc acgcggttcg gcgcgcgcaa ggtcggctcg atgggctgac
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49 781 gaggcccgtt aaccacgttt gttaacctcc gccggggcct taaccctaac acggcgaggg
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50 841 ttaacaggtc cagggaccct tcgaaattaa cctttcgggg accctgggaa atcgtaaggc
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51 901 ggggaccctg gccattttcc ggctggggac cctggcaaat tcatcgccgg ggaccctccg
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52 961 aaattcatcc tcggggaccc tggcaaatca aggagccggc gatggccgaa tttctcgccc
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53 1021 tgatccccaa cctcgcgccg ttcctggcct ggggaatcct cctctggatc gccgccgagg
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54 1081 tggtctggag cgtctgcctc tgggtctatg gcctgcggac cctgttcaag ctgcaccgcg
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55 1141 acgatctggc cgaggcgatc agcttcgagc gggcgctcag ccccttcgac taggcgcggc
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56 1201 ctgccgacct aagtcacaga ctgtaggttt cgtgacaagg taggatattt cacaacgatt
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57 1261 tcaagggctt atacctatga cgatccgaca ctacctccac gatctggccg tccgtttcgt
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58 1321 cgttttgggg tggatttttg ccaaaaagcc ccgaaaaacc gctccaaaag ggcaaaattt
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59 1381 tcagccccat ccgccggccc tggtcgactg ggaccaccgc tggctctatc tggcggccgg
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60 1441 tactgggctg acggcggtct ggctctgctt cagattcgtt ggtccaagtc aagacccctc
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61 1501 gaccgccccg ccgccaagtc atagaccgtg ggcttcgtga ccagatcacg cttccgttac
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62 1561 cgctccagcc cttgtgaggc ctcggatgtt cgcctttctc cgccggctca gcctcgccgc
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63 1621 cgtccatggc gtgctctggg cgatcctcct ggcgatgctc gccctgggcg gcccgcgccg
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64 1681 cgcgccctaa agcgtcatat ctgacgccta aagccctcta agggctcatc tgtgagacat
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65 1741 tcaacgccct cgtgttcctc tgaacgcggg ggcgttttga cgtccgagcg ttttgacgcg
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66 1801 ggcgcatttt cgacttgacg cgcgagcgtt ttgacgcggg cgcatttttg attcgacggg
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67 1861 cgagcgtttt gacgtccgag cgtttttcaa cttgacgtcg tttcatttac cgcgagcgcc
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68 1921 ttagggttaa cgccggccgc cgagccctgg ggcgatttac caccaccgcg ttaacctaac
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69 1981 gcctgttaac ctatcggttg
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70 //
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71 LOCUS Colossus 2000 bp DNA linear UNK 27-APR-2012
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72 DEFINITION Phage Colossus.
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73 ACCESSION Colossus
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74 VERSION Colossus
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75 KEYWORDS .
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76 SOURCE .
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77 ORGANISM .
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78 .
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79 FEATURES Location/Qualifiers
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80 source 1..2000
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81 /note="Source genome originally 279967 bp"
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82 /note="Cut from 1 to 2000"
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83 ORIGIN
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84 1 ggccccgacc ccgagcgctc atctacattt ggtgccaatt tcgacatcac cccatagatg
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85 61 tggggcaaat ctcgggctct agacacctgg gattctgcgg ggcgcgttaa ccatgtttgt
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86 121 ttacgttact gcgcgcccga ccggtaaccc taattcgtag tcttaaaatc cccgagttta
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87 181 cctggagtat ggcccagcac tacccggtca gactgctccg gtatggctgc gagatcagcg
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88 241 cgtcgacagc ctcctcgacc tgtctgcgcg ctgacagccg ccggcgcctg ccctcaaacc
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89 301 tacggacctc cgtcaccaaa cctacggagt ccgccgatcg aggtccgcag gttggggacc
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90 361 cttcaaaatt caccctgggg acccttcgaa attcatgggc cagggaccct ggaaatttta
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91 421 ccgggggacc cttcgaaatt ctgcctccgg ggaccctggg aaattctgga gccagggacc
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92 481 ctggaaaatt cacccagatt tccggcccga atcgcctccc atttaagccc aaccctcaga
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93 541 tcggcagaaa tatcggcgat tttaccccat tttgggccta aaatccctta aaaatcagcc
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94 601 ttttagctcc atttcaacat cggcagcgcc cgctccgcgc cctgcctgac tgtagtcatc
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95 661 cttcaacgca aatgtgactc accgacctgt cgccacaatt cctcccatct tttcaacatg
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96 721 ttacagagtc acatctcaaa tccggccacg cccagcccga tccggtcatc cggccagacc
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97 781 ttaatccgga catatccgga cagagcccca tcccagaaac ctcaatgaaa tcaacacgac
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98 841 caccttgcca aacgtgacta tccggacata tccggccacg caaacgtgac tctcaccata
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99 901 ttgctgcacc gcaacataat cccagcccgt acaacccatt tcggttgtat ttcgacctca
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100 961 caaccgattt tggttgtatc ggcccagaca catccctcct ctcctgtcaa tcccacctac
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101 1021 ctgcgacctc ctcgcagtcc tgaattggca gaaacgagac tgtgtcgccg gcgccgcgcc
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parents:
diff changeset
102 1081 cctgcgttat cgtgccacgc ttgccagccc gccaggatcg tgccctactg tctctcggga
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103 1141 gccggtctcc ctggcctgca cgtcgtagac gctagtcggt accccctcac ccagcccgag
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cpt
parents:
diff changeset
104 1201 ggcattccag acgctagtcc gccgctcgca ggcggcttcg atcgctctct cccaaggcga
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cpt
parents:
diff changeset
105 1261 tcgaggtcag gccggctcct atcccacctc caggagccca aaacagggtc aggagcccgg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
106 1321 attagcccga ttctgggcta aaaacgcctc aaatcggccg aaaaacacga caaaacgcca
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cpt
parents:
diff changeset
107 1381 tttcattcgc aaaactcgac gcgattccat taatttgacg cgacgccatt ccatttcgcc
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cpt
parents:
diff changeset
108 1441 gactcgacat gacgcgattc cattccggcg actcgacatg acgccatttc attttcttga
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cpt
parents:
diff changeset
109 1501 cgcgacgcca ttccatcccg ccggctccag accaccgccc aggtcgatta gggtaaacgt
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cpt
parents:
diff changeset
110 1561 caggcccgtt aaccacgttc gttagggtta ccggtccagg taaggttacg aattagggta
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cpt
parents:
diff changeset
111 1621 aacagggcgt tagggttaat gccccgttag ggttaacacc gcgatgcaca ctaacactac
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
112 1681 tactgttagg gttaacgcca ctgttagggt tacgaattag ggttaacgcg cccggccggt
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
113 1741 attactcggc actacccggt aatacctaat ggccattagg gttaacgccc tgcgagcgcg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
114 1801 cagccccgcc gttgcgcccc tacggttcga agagcccggc ccctgccggg tcccgcccgg
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cpt
parents:
diff changeset
115 1861 ctacatctac accttagcct ctatttctta acaaaccgta aacgccgggc agtttcccgc
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cpt
parents:
diff changeset
116 1921 ccggcgccgg cttagtcgtc agattgcgcg gctaggccat aatcgcagtc atcccacaac
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parents:
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117 1981 caagagagga tgtaatccgg
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118 //
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119 LOCUS Karma 2000 bp DNA UNK 01-JAN-1980
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120 DEFINITION Phage Karma.
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121 ACCESSION Karma
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122 VERSION Karma
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diff changeset
123 KEYWORDS .
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parents:
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124 SOURCE .
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parents:
diff changeset
125 ORGANISM .
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126 .
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127 FEATURES Location/Qualifiers
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128 source 1..2000
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129 /note="Source genome originally 221828 bp"
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130 /note="Cut from 1 to 2000"
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131 CDS 1002..1193
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132 /product="hypothetical conserved protein"
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133 /locus_tag="Karma_gp001"
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134 /codon_start=1
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135 /translation="MAEFLALIPNLAPFLVWGILLWIAAEVVWSVCLWVYGLRTLFKLH
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136 RDDLAEAISFERALSPFD"
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137 /transl_table=11
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parents:
diff changeset
138 CDS 1277..1525
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
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139 /product="hypothetical conserved protein"
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parents:
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140 /locus_tag="Karma_gp002"
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141 /codon_start=1
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parents:
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142 /translation="MSIRTFFHDLAVRFVVLGWIFARKPLKWAPKGHNFQPKPPVQVGA
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parents:
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143 LAAGSLLALSLALGGLWFRFTFPDKSQVVSRRPQAMS"
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parents:
diff changeset
144 /transl_table=11
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parents:
diff changeset
145 CDS 1587..1691
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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146 /product="hypothetical conserved protein"
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147 /locus_tag="Karma_gp003"
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148 /codon_start=1
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149 /translation="MFAFLRRLSLAAVHGVLWAILLAMLALGGPRRPL"
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diff changeset
150 /transl_table=11
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parents:
diff changeset
151 terminator 1746..1775
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parents:
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152 /note="predicted rho-independent terminator"
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diff changeset
153 ORIGIN
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cpt
parents:
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154 1 gggctctggg cgaagttttg tgggactact atgacttgca ttatttcaag cgcaagcggt
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
155 61 ccgagtggaa gtaccaaaga tttgctttgg tttatcaaca acttgccgac gcggcctcgg
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parents:
diff changeset
156 121 acacctccat cgcgtccaag tttcagacct acgatcacct gccccacctg gagccgaagg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
157 181 tgctcaaggc ccggcttgac gcgggtcacg ccgacgagcg cgggcggccg attccggacc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
158 241 gcaaggagca cttccggcgg gtggtggtca gcgtcgactc ggccaacaag cccggcgccc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
159 301 gcaacgacta cagcgtcgcc caggtctggg gggagaccca cgcccgcaag cactacctga
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cpt
parents:
diff changeset
160 361 tctaccagga gcgcaagaag gtcgacatca ccggcctgac cgagatgatc gagcgggtgg
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cpt
parents:
diff changeset
161 421 ccaagcgcta cgaggtcgac gccatcctgg tcgaagacaa gggcaacggc accgcctaca
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
162 481 tccaggcgcg gggccagacc gacagccagc ggcggctcgc cccggccccg atcgaggcga
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cpt
parents:
diff changeset
163 541 tccaggtccc gagcacctat tccaaggagt tccgcttcaa cgagatcgtc ccgatgatcg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
164 601 aggccggcga ggtcttcctg ccgggcaagg ccccgtggct cgacctgctg atccgcgaaa
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
165 661 tcggtcagtt ccccgaaggc gcccatgacg accaagtcga cgccatgacg cagtacctcc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
166 721 gctgggccaa gtccaagcgc acgcggttcg gcgcgcgcaa ggtcggctcg atgggctgac
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cpt
parents:
diff changeset
167 781 gaggcccgtt aaccacgttt gttaacctcc gccggggcct taaccctaac acggcgaggg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
168 841 ttaacaggtc cagggaccct tcgaaattaa cctttcgggg accctgggaa atcgtaaggc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
169 901 agggaccctg gccattttcc ggctggggac cctggcaaat tcaccgccgg ggaccctccg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
170 961 aaattcatcc tcggggaccc tggcaaatca aggagccggc gatggccgaa tttctcgccc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
171 1021 tgatccccaa cctcgcgccg ttcctggtct ggggaatcct cctctggatc gccgccgagg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
172 1081 tggtctggag cgtctgcctc tgggtctatg gcctgcggac cctgttcaag ttgcaccgcg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
173 1141 atgatctggc cgaggcgatc agcttcgagc gggccttgag ccccttcgac taggcgcggc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
174 1201 ctgccgacct aagtcacgga ctgtaggttt cgtgacaagg tgagatattc cacaacgatt
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cpt
parents:
diff changeset
175 1261 tcaaaggctt actgcgatgt cgatccgcac gttcttccac gatctggccg tccgtttcgt
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
176 1321 cgttttgggg tggatttttg cccgaaaacc gctgaaatgg gctccaaaag ggcataattt
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff changeset
177 1381 tcagcctaaa ccgccggtcc aggtcggcgc cctggcggcc ggctcgctcc tcgccctcag
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cpt
parents:
diff changeset
178 1441 tctggcgctc ggcgggctct ggttccgctt cacgtttccg gacaaaagtc aagtggtctc
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parents:
diff changeset
179 1501 gcgccggccg caggctatgt catagaccgt gggcttcgtg accagatcac gcttccgtta
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cpt
parents:
diff changeset
180 1561 ccgctccagc ccttgtgagg cctcggatgt tcgcctttct ccgccggctc agcctcgccg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
181 1621 ccgtccatgg cgtgctctgg gcgatcctcc tggcgatgct cgccctgggc gggccgcgcc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
182 1681 gcccgctcta aagcgtcata tctgacgcct aaggccccct aaggcctcat ctgtgagaca
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
183 1741 ttcaacgccc tcgtgttcct ctgaacgcgg gggcgttttg acgtcggcgc atttttgact
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cpt
parents:
diff changeset
184 1801 tgacgcgcga gcgttttgac gcgggcgcat ttttgattcg acgggcgagc gttttgacgt
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
185 1861 ccgagcattt ttcaacttga cgtcgttcca tttaccggga gcgccttagg gttaacgccg
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parents:
diff changeset
186 1921 gccgccgagc cctggggcga tttaccaccg ccacgttaac ctaacgcctg ttaacctatc
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parents:
diff changeset
187 1981 ggttgttaag gttaacgccc
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diff changeset
188 //
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diff changeset
189 LOCUS Magneto 2000 bp DNA UNK 01-JAN-1980
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parents:
diff changeset
190 DEFINITION Bacteriophage Magneto.
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diff changeset
191 ACCESSION Magneto
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parents:
diff changeset
192 VERSION Magneto
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193 KEYWORDS .
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194 SOURCE .
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff changeset
195 ORGANISM .
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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196 .
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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197 FEATURES Location/Qualifiers
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198 source 1..2000
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
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199 /note="Source genome originally 218929 bp"
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parents:
diff changeset
200 /note="Cut from 1 to 2000"
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parents:
diff changeset
201 CDS 1014..1217
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parents:
diff changeset
202 /product="hypothetical conserved protein"
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parents:
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203 /locus_tag="Magneto_gp001"
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parents:
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204 /codon_start=1
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
205 /translation="MEPTMAGFLNLIPNLAPFALWGILLWIAAEVVWSVCLWVYGLRTL
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
206 FKLHRDDVAEALTLERALAPFD"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
207 /transl_table=11
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
208 CDS 1287..1535
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
209 /product="hypothetical conserved protein"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
210 /locus_tag="Magneto_gp002"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
211 /codon_start=1
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
212 /translation="MSIRTFFHDLAVRFVVLGWIFARKPLKWAPKGHNFQPKPPVQVGA
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
213 LAAGSLLALSLALGGLWFRFTFPDKSQVVSRRPQAMS"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
214 /transl_table=11
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
215 CDS 1597..1701
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
216 /product="hypothetical conserved protein"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
217 /locus_tag="Magneto_gp003"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
218 /codon_start=1
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
219 /translation="MFAFLRRLSLAAVHGVLWAILLAMYAVGGPRRAP"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
220 /transl_table=11
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
221 ORIGIN
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
222 1 gcgccctggg cgaagttttg tgggactact atgacttgca ttatttcaag cgcaagcggt
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
223 61 ccgagtggaa gtaccaaaga tttgctttgg tttatcaaca acttgccgac gcggcctcgg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
224 121 acacctccat cgcgtccaag tttcagacct atgatcacct gccgcacctg gagccgaagg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
225 181 tgctcaaggc ccggcttgac gcgggtcacg ccgacgagcg cgggcggccg attccggacc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
226 241 gcaaggagca cttccggcgg gtggtggtca gcgtcgactc ggccaacaag cccggcgccc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
227 301 gcaacgacta cagcgtcgcc caggtctggg gggagaccca cgcccgcaag cactacctga
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
228 361 tctaccagga gcgcaagaag gtcgacatca ccggcctgac cgagatgatc gagcgggtgg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
229 421 ccaagcgcta cgaggtcgac gccatcctgg tcgaagacaa gggcaacggc accgcctaca
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
230 481 tccaggcgcg gggccagacc gacagccagc ggcggctcgc cccggccccg atcgaggcga
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
231 541 tccaggtccc gagcacctat tccaaggagt tccgcttcaa cgagatcgtc ccgatgatcg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
232 601 aggccggcga ggtcttcctg ccgggcaagg ccccgtggct cgacctgctg atccgcgaaa
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
233 661 tcggtcagtt ccccgaaggc gcccatgacg accaagtcga cgccatgacg cagtacctcc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
234 721 gctgggccaa gtccaagcgc acgcggtttg gcgcgcgcaa ggtcggctcg atgggctgac
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
235 781 gaggcccgtt aaccacgttt gttaacctcc gccggggcct taaccctaac acggcgaggg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
236 841 ttaacaggcc agggaccctt cgaaattaac ctttcgggga ccctgggaaa tcgtaaggcg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
237 901 gggaccctgg ccattttccg cctggggacc ctccaaaatt caccgtcggg gaccctggga
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
238 961 aattcatctt ccggggaccc tggcaaattc aaagccgggg accctggcga atcatggagc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
239 1021 cgacgatggc cggatttctc aacctgatcc cgaacctcgc gccgttcgcg ctttggggaa
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
240 1081 tcctcctctg gatcgccgcc gaggtggtct ggagcgtctg cctctgggtc tatggcctgc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
241 1141 gaaccctgtt caagctgcac cgtgacgatg tggccgaggc cctgaccctg gagcgggctc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
242 1201 tggcgccgtt cgactgaccc aagtcacgga ctgtaggttt cgtgacaagg tgagatattc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
243 1261 cacaacgatt tcaaaggctt actgcgatgt cgatccgcac gttcttccac gatctggccg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
244 1321 tccgtttcgt cgttttgggg tggatttttg cccgaaaacc gctgaaatgg gctccaaaag
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
245 1381 ggcataattt tcagcccaaa ccgccggtcc aggtcggcgc cctggcggcc ggctcgctcc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
246 1441 tcgccctcag tctggcgctc ggcgggctct ggttccgctt cacgtttccg gacaaaagtc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
247 1501 aagtggtctc gcgccggccg caggctatgt catagaccgt gggcttcgtg accagatcac
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
248 1561 gcttccgtta ccgctccagc ccttgtgagg cctcggatgt tcgcctttct ccgccggctc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
249 1621 agcctcgccg ccgtccatgg cgtgctctgg gcgatcctcc tggcgatgta cgccgtgggc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
250 1681 gggccgcgcc gcgcgcccta aagcgccata tctgacgcct aaggccccct aaggcctcat
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
251 1741 ctgtgagaca ttcaacgccc tcgtgttcct ctgaacgcgg gggcgttttg acgtcggcgc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
252 1801 atttttgact tgacgcgcga gcgttttgac gcgggcgcat tttcgattcg acgcgcgagc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
253 1861 gttttgacgt ccgagcattt ttcaacttga cgtcgttcca tttaccggga gcgccttagg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
254 1921 gttaacgccg gccgccgagc cctggggcga tttaccaccg ccacgttaac ctaacgcctg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
255 1981 ttaacctatc ggttgttaag
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
256 //
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
257 LOCUS Rogue 2000 bp DNA UNK 01-JAN-1980
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
258 DEFINITION Phage Rogue.
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
259 ACCESSION Rogue
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
260 VERSION Rogue
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
261 KEYWORDS .
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
262 SOURCE .
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
263 ORGANISM .
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
264 .
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
265 FEATURES Location/Qualifiers
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
266 source 1..2000
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
267 /note="Source genome originally 223720 bp"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
268 /note="Cut from 1 to 2000"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
269 CDS 992..1225
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
270 /product="hypothetical conserved protein"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
271 /locus_tag="Rogue_gp001"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
272 /codon_start=1
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
273 /translation="MAELMSLLFNIAPFLLLAIVVYHVLEAVWAISLWVYGLRTLWKLH
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
274 RDDVSEALTLERALSPFSSPGRDRNGNPVPPA"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
275 /transl_table=11
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
276 CDS 1298..1546
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
277 /product="hypothetical conserved protein"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
278 /locus_tag="Rogue_gp002"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
279 /codon_start=1
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
280 /translation="MSIRTFFHDLAVRFVVLGWIFAQKPQKWAPKGHNFQPIPPAQVER
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
281 QDLRGRVLLLRSFGVLAAACTTMGLCQYLLWRRAPMS"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
282 /transl_table=11
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
283 CDS 1594..1692
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
284 /product="hypothetical conserved protein"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
285 /locus_tag="Rogue_gp003"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
286 /codon_start=1
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
287 /translation="MPHLGFWLSAACIALAWAIWALRRLIAPPPPA"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
288 /transl_table=11
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
289 ORIGIN
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
290 1 gcgctctggg cgaagttttg tgggactact atgacttgca ttacttcaaa cggaagcgct
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
291 61 ccgagtggaa gtaccaaaga tttgctttgg tttatcaaca acttgcggac gccgcctcgg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
292 121 acacgtcgat cgcgtccaag ttccagacct accagcacct gccgcacctg gacccgaagg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
293 181 tcctcaaggc gcgcatggac gcggggcatg ttgacgatcg cggccggccg atcccggacc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
294 241 gcaaggagca cttccgccgc atcgtgacct cggtcgacgc ggcccagaaa aagggcgcgc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
295 301 gcaacgacta cacggtcgtc caggtgtggg gcgagaccca cgatcgcaag cactacctga
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
296 361 tctaccagga gcgcaagaag gtcgagatca acgacctgat cgagatggtc gagcgcatct
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
297 421 ccaagcgctt cgacgtcgac tctatcctgg tcgaggacaa gggcaacggc accgcctaca
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
298 481 tccaggcgcg gggccagacc gacagccagc gccggctcgc gccggccccg atcgaggcga
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
299 541 tccaggtccc cagcacctac tccaaggagt tccgcttcaa cgaggtcatc ccgatgatcg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
300 601 aggcgcaaga ggtctacctg cccgacaagg cgccgtggct ggacctgttc atccgcgaag
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
301 661 tcgggcagtt ccccgaaggc gcccacgatg accaagtcga cgccatgacg cagtacctcc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
302 721 gctgggccaa gtccaagcgc tcgcggttcg gcgcgcgcaa ggtcggctcg atgggctgat
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
303 781 taaccatctt cgttcaccct gtccgggcct gttaacctta acacaccgat ggttaacagg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
304 841 ccagggaccc atcgaaatta acccttgggg acccagggga atcgtcagcc ggggaccctg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
305 901 ggaaattaac ccttggggac ccaccaaaat caaccttcgg ggaccctagc gaatcgtggc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
306 961 tcggggaccc tggcaaatca aggagccggc gatggccgaa ctcatgagcc tgctgttcaa
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
307 1021 catcgccccg ttcctgctgc tggcgatcgt cgtctaccac gtcctggagg ccgtctgggc
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cpt
parents:
diff changeset
308 1081 gatcagcctg tgggtctacg gcctgcgcac cctgtggaag ctccaccgcg acgacgtcag
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
309 1141 cgaggccctg accctggagc gggccttgag ccccttctcc agccctggcc gcgaccgcaa
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
310 1201 cggcaatccc gtcccgccgg cctgacgacc tatgtcacgg actgtaggtt tcatgacaag
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
311 1261 gtggattatt ccacaacgaa atcaaaggct tatcgccatg tcgatccgca ccttcttcca
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
312 1321 cgacctcgcc gtccgtttcg tcgttttggg gtggattttt gcccaaaaac cccagaaatg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
313 1381 ggctccaaaa gggcataatt ttcagcccat cccgccggcc caggtcgagc ggcaggacct
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
314 1441 ccgggggcgc gtgcttctcc tgaggagctt cggcgtcctc gccgccgcat gcacaaccat
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
315 1501 gggcctgtgt caatacctgc tctggcgccg cgcgcccatg tcatagacca tcgctttcgt
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
316 1561 gacagcttca cgatcccgtt accggacaac cccatgcccc acctcggttt ctggctctcc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
317 1621 gccgcctgca tcgccctggc ctgggcgatc tgggcgctac ggcggctgat cgccccacca
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
318 1681 ccgcccgcct gaccccggcc gcgcgcgccc gcgccgccgg tatcgcccgg ccaaagcgtc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
319 1741 atatatgagc ccttaacccc tctaaggtcg catatatgag accttacggc cctcttgacg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
320 1801 ccctcgtgtt cctctgaacg cgggggcgtt ttgacgtcgg cgcatttcca actcaacgcg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
321 1861 cggccgtttt gacgtccgag cgttttgacg cgagcgcatt ttcgattcga cgggcgagcg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
322 1921 ttttgacgtc cgaccgtttt tcaacttgac gtcgtttcat ttaccaagag cgccttaagg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
323 1981 ttaaccgccg agcctgggaa
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cpt
parents:
diff changeset
324 //
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff changeset
325 LOCUS Swift 2000 bp DNA UNK 01-JAN-1980
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parents:
diff changeset
326 DEFINITION Phage Swift.
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parents:
diff changeset
327 ACCESSION Swift
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parents:
diff changeset
328 VERSION Swift
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parents:
diff changeset
329 KEYWORDS .
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cpt
parents:
diff changeset
330 SOURCE .
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
331 ORGANISM .
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parents:
diff changeset
332 .
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parents:
diff changeset
333 FEATURES Location/Qualifiers
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parents:
diff changeset
334 source 1..2000
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff changeset
335 /note="Source genome originally 219216 bp"
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parents:
diff changeset
336 /note="Cut from 1 to 2000"
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parents:
diff changeset
337 CDS 1026..1217
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff changeset
338 /product="hypothetical conserved protein"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff changeset
339 /locus_tag="Swift_gp001"
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parents:
diff changeset
340 /codon_start=1
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parents:
diff changeset
341 /translation="MAGFLNLIPNLAPFALWGVLLWIAAEVVWSVCLWVYGLRTLFKLH
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff changeset
342 RDDLAEAISFERALSPFD"
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parents:
diff changeset
343 /transl_table=11
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff changeset
344 CDS 1301..1549
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
345 /product="hypothetical conserved protein"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff changeset
346 /locus_tag="Swift_gp002"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff changeset
347 /codon_start=1
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff changeset
348 /translation="MSIRAFLHDLAVRFVVLGWIFAQKPQKWAPKGHNFQPIPPAQVER
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
349 QDLRGRVLLLRSFGVLAAACTTMGLCQYLLWRRAAMS"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff changeset
350 /transl_table=11
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff changeset
351 CDS 1597..1695
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
352 /product="hypothetical conserved protein"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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parents:
diff changeset
353 /locus_tag="Swift_gp003"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
354 /codon_start=1
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
355 /translation="MPHLGFWLSAACIALAWAIWALRRLIGPPPPT"
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
356 /transl_table=11
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
357 ORIGIN
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
358 1 gggctctggg cgaagttttg tgggactact atgacttgca ttatttcaag cgcaagcggt
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
359 61 ccgagtggaa gtaccaaaga tttgctttgg tttatcaaca acttgccgac gcggcctcgg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
360 121 acacctccat cgcgtccaag tttcagacct acgatcacct gccccacctg gagccgaagg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
361 181 tgctcaaggc ccggcttgac gcgggtcacg ccgacgagcg cgggcggccg attccggacc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
362 241 gcaaggagca cttccggcgg gtggtggtca gcgtcgactc ggccaacaag cccggcgccc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
363 301 gcaacgacta cagcgtcgcc caggtctggg gggagaccca cgcccgcaag cactacctga
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
364 361 tctaccagga gcgcaagaag gtcgacatca ccggcctgac cgagatgatc gagcgggtgg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
365 421 ccaagcgcta cgaggtcgac gccatcctgg tcgaagacaa gggcaacggc accgcctaca
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
366 481 tccaggctcg gggccagacc gacagccagc ggcggctcgc cccggccccg atcgaggcga
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
367 541 tccaggtccc gagcacctat tccaaggagt tccgcttcaa cgagatcgtc ccgatgatcg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
368 601 aggccggcga ggtcttcctg ccgggcaagg ccccgtggct cgacctgctg atccgcgaaa
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
369 661 tcggtcagtt ccccgaaggc gcccatgacg accaagtcga cgccatgacg cagtacctcc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
370 721 gctgggccaa gtccaagcgc acgcggttcg gcgcgcgcaa ggtcggctcg atgggctgac
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
371 781 gaggcccgtt aaccacgttt gttaacctcc gccggggcct taaccctaac acggcgaggg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
372 841 ttaacaggtc cagggaccct tcgaaattaa cctttcgggg accctgggaa atcgacagac
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
373 901 ggggaccctg gccattttcc ggctggggac cctgccaaat tcatcgccgg ggaccctccg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
374 961 aaattcatct ctggggaccc tggcgaattc agagccgggg accctggcga atcatggagc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
375 1021 cgacgatggc cggatttctc aacctgatcc cgaacctcgc gccgttcgcg ctttggggcg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
376 1081 tcctcctctg gatcgccgcc gaggtggtct ggagcgtctg cctctgggtc tacggcctgc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
377 1141 ggaccctgtt caagctgcac cgcgacgatc tggccgaggc gatcagcttc gagcgggcct
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
378 1201 tgagcccctt cgactaggcg cggcctgccg acctaagtca cggactgtag gtttcatgac
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
379 1261 aaggtggatt attccacaac gaaatcaaag gcttatcgcc atgtcgatcc gcgcgttcct
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
380 1321 ccacgatctg gctgtccgct tcgtcgtttt ggggtggatt tttgctcaaa aaccccagaa
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
381 1381 atgggctcca aaagggcata attttcagcc catcccgccg gcccaggtcg agcggcagga
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
382 1441 cctccggggg cgcgtgctac tcctgaggag cttcggcgtc ctcgccgccg catgcacaac
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
383 1501 catgggcctg tgtcaatacc tgctctggcg ccgcgcggcc atgtcataga ctagggcttt
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
384 1561 cgtgacagct tcacgatccc gttaccggac aaccccatgc ctcacctggg tttctggctc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
385 1621 tccgccgcct gcatcgctct ggcctgggcg atctgggcgc tgcggcggct gatcggccca
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
386 1681 ccaccgccca cctgataccg gcggcgcgag cccgcgccgc cggtatcgcc cggccaaagc
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
387 1741 atcatatatg agcccttaac ccctctaagg tctcatatat gcgaccttac ggccctcttg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
388 1801 acgccctcgt gttcctctga acgcgggggc gttttgacgt cggcgcattt ccaactcaac
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
389 1861 gcgcggccgt tttgacgtcc gagcgttttg acgcgagcgc attttcgatt cgacgggcga
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
390 1921 gcgttttgac gtccgaacgt ttttcaactt gacgtcgttt catttaccac gagcgcctta
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
391 1981 aggttaaccg ccgagcctgg
1909729a1fd3 planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
cpt
parents:
diff changeset
392 //