Mercurial > repos > cpt > cpt_psm_comparison_table
annotate lib/CPT/Writer.pm @ 1:f093e08f21f3 draft default tip
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| date | Mon, 05 Jun 2023 02:47:24 +0000 | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
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changeset | 1 package CPT::Writer; | 
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changeset | 2 use Moose::Role; | 
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changeset | 3 use strict; | 
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changeset | 4 use warnings; | 
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changeset | 5 use autodie; | 
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changeset | 6 | 
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changeset | 7 requires 'process'; | 
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changeset | 8 requires 'suffix'; | 
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changeset | 9 | 
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changeset | 10 # One or the other of these will be set. *ought* to be in accordance w/ galaxy_override | 
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changeset | 11 has 'OutputFilesClass' => ( is => 'rw' ); | 
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changeset | 12 | 
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changeset | 13 # This parameter specifies that we should behave according to galaxy_override spec. | 
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changeset | 14 has 'galaxy_override' => ( is => 'rw', isa => 'Bool' ); | 
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changeset | 15 has 'title' => ( is => 'rw', isa => 'Str' ); | 
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changeset | 16 has 'author' => ( is => 'rw', isa => 'Str' ); | 
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changeset | 17 has 'data' => ( is => 'rw' ); | 
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changeset | 18 has 'processed_data' => ( is => 'rw' ); | 
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changeset | 19 has 'processing_complete' => ( is => 'rw', isa => 'Bool' ); | 
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changeset | 20 # What file names were generated during the writing process | 
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changeset | 21 has 'used_filenames' => ( is => 'rw', isa => 'ArrayRef', default => sub { [] }); | 
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changeset | 22 # An optional, hinted at name. Otherwise we'll generate one. | 
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changeset | 23 has 'name' => ( is => 'rw', isa => 'Str' ); | 
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changeset | 24 | 
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changeset | 25 sub write { | 
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changeset | 26 my ($self) = @_; | 
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changeset | 27 if ( $self->processing_complete ) { | 
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changeset | 28 $self->OutputFilesClass->extension( $self->suffix() ); | 
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changeset | 29 my $next_output_file = $self->OutputFilesClass->get_next_file(); | 
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changeset | 30 # Store the name of the file we used | 
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changeset | 31 push(@{$self->used_filenames()}, $next_output_file); | 
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changeset | 32 # Write data out | 
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changeset | 33 open(my $outfile, '>', $next_output_file ); | 
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changeset | 34 print $outfile $self->processed_data; # given that processed_data is a string... | 
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changeset | 35 close($outfile); | 
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changeset | 36 } | 
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changeset | 37 else { | 
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changeset | 38 warn "Write called but processing was not marked as complete. Not writing"; | 
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changeset | 39 } | 
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changeset | 40 } | 
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changeset | 41 | 
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changeset | 42 sub get_name { | 
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changeset | 43 my ($self) = @_; | 
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changeset | 44 #return $self->OutputFilesClass->get_next_file(); | 
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changeset | 45 return $self->OutputFilesClass->_get_filename(); | 
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changeset | 46 } | 
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changeset | 47 | 
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changeset | 48 sub process_data { | 
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changeset | 49 my ($self) = @_; | 
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changeset | 50 if (!defined $self->data ) { | 
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changeset | 51 #confess "No data to process."; | 
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changeset | 52 } | 
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changeset | 53 $self->process(); | 
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changeset | 54 } | 
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changeset | 55 | 
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changeset | 56 no Moose::Role; | 
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changeset | 57 1; | 
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changeset | 58 | 
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changeset | 59 __END__ | 
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changeset | 60 | 
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changeset | 61 =pod | 
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changeset | 62 | 
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changeset | 63 =encoding UTF-8 | 
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changeset | 64 | 
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changeset | 65 =head1 NAME | 
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changeset | 66 | 
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changeset | 67 CPT::Writer | 
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changeset | 68 | 
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changeset | 69 =head1 VERSION | 
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changeset | 70 | 
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changeset | 71 version 1.99.4 | 
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changeset | 72 | 
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changeset | 73 =head1 AUTHOR | 
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changeset | 74 | 
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changeset | 75 Eric Rasche <rasche.eric@yandex.ru> | 
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changeset | 76 | 
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changeset | 77 =head1 COPYRIGHT AND LICENSE | 
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changeset | 78 | 
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changeset | 79 This software is Copyright (c) 2014 by Eric Rasche. | 
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changeset | 80 | 
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changeset | 81 This is free software, licensed under: | 
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changeset | 82 | 
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changeset | 83 The GNU General Public License, Version 3, June 2007 | 
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changeset | 84 | 
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changeset | 85 =cut | 
