diff lib/CPT/Filetype/fasta.pm @ 1:f093e08f21f3 draft default tip

planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
author cpt
date Mon, 05 Jun 2023 02:47:24 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/lib/CPT/Filetype/fasta.pm	Mon Jun 05 02:47:24 2023 +0000
@@ -0,0 +1,51 @@
+package CPT::Filetype::fasta;
+no warnings;
+use Moose;
+with 'CPT::Filetype';
+
+sub score {
+	my ($self) = @_;
+	my @l = @{$self->lines()};
+
+	for(my $i = 0; $i < scalar(@l) - 1; $i++){
+		if(substr($l[$i],0,1) eq '>' && $l[$i+1] =~ /[A-Za-z]/){
+			return 1;
+		}
+	}
+	return 0;
+}
+
+sub name {
+	return 'fasta';
+}
+
+no Moose;
+1;
+
+__END__
+
+=pod
+
+=encoding UTF-8
+
+=head1 NAME
+
+CPT::Filetype::fasta
+
+=head1 VERSION
+
+version 1.99.4
+
+=head1 AUTHOR
+
+Eric Rasche <rasche.eric@yandex.ru>
+
+=head1 COPYRIGHT AND LICENSE
+
+This software is Copyright (c) 2014 by Eric Rasche.
+
+This is free software, licensed under:
+
+  The GNU General Public License, Version 3, June 2007
+
+=cut