Mercurial > repos > cpt > cpt_psm_plotter
annotate lib/CPT/Bio/DataSource/GFF3.pm @ 1:8691c1c61a8e draft default tip
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
| author | cpt | 
|---|---|
| date | Mon, 05 Jun 2023 02:48:47 +0000 | 
| parents | |
| children | 
| rev | line source | 
|---|---|
| 
1
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
1 package CPT::Bio::DataSource::GFF3; | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
2 no warnings; | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
3 use Moose; | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
4 with 'CPT::Bio::DataSource'; | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
5 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
6 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
7 sub getSeqIO { | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
8 die 'unimplemented'; | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
9 } | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
10 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
11 no Moose; | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
12 1; | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
13 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
14 __END__ | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
15 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
16 =pod | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
17 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
18 =encoding UTF-8 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
19 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
20 =head1 NAME | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
21 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
22 CPT::Bio::DataSource::GFF3 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
23 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
24 =head1 VERSION | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
25 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
26 version 1.99.4 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
27 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
28 =head2 getSeqIO | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
29 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
30 =head1 AUTHOR | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
31 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
32 Eric Rasche <rasche.eric@yandex.ru> | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
33 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
34 =head1 COPYRIGHT AND LICENSE | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
35 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
36 This software is Copyright (c) 2014 by Eric Rasche. | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
37 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
38 This is free software, licensed under: | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
39 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
40 The GNU General Public License, Version 3, June 2007 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
41 | 
| 
 
8691c1c61a8e
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
cpt 
parents:  
diff
changeset
 | 
42 =cut | 
