Mercurial > repos > cpt > cpt_psm_plotter
annotate lib/CPT/Writer/Spreadsheet/XLSX.pm @ 1:8691c1c61a8e draft default tip
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
| author | cpt | 
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| date | Mon, 05 Jun 2023 02:48:47 +0000 | 
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| rev | line source | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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1 package CPT::Writer::Spreadsheet::XLSX; | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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2 use Moose; | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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3 with 'CPT::Writer', 'CPT::Writer::Spreadsheet'; | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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4 use Excel::Writer::XLSX; | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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5 | 
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6 #http://search.cpan.org/~jmcnamara/Excel-Writer-XLSX/lib/Excel/Writer/XLSX.pm#SPEED_AND_MEMORY_USAGE | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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7 # | 
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8 #The effect of this is that Excel::Writer::XLSX is about 30% slower than Spreadsheet::WriteExcel and uses 5 times more memory. | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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9 # | 
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10 #This memory usage can be reduced almost completely by using the Workbook set_optimization() method: | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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11 # | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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12 # $workbook->set_optimization(); | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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13 # | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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14 sub process { | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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15 my ($self) = @_; | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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16 if ( $self->galaxy_override ) { | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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17 die 'This class currently incompatible with Galaxy'; | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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18 } | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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19 my $workbook = Excel::Writer::XLSX->new( | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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20 join( '.', $self->outfile(), $self->suffix() ) ); | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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21 $workbook->set_optimization(); | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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22 my %data = %{ $self->data }; | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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23 my @sheets = keys %data; | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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24 foreach (@sheets) { | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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25 my $current_worksheet = $workbook->add_worksheet($_); | 
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26 my $data_struc_ref = $data{$_}; | 
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27 | 
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28 #R,C,AR | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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29 $current_worksheet->write_row( 0, 0, | 
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30 ${$data_struc_ref}{'header'} ); | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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31 my $row = 1; | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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32 foreach ( @{ ${$data_struc_ref}{'data'} } ) { | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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33 $current_worksheet->write_row( $row, 0, $_ ); | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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34 $row++; | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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35 } | 
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36 } | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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37 $self->processed_data($workbook); | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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38 $self->processing_complete(1); | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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39 } | 
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40 | 
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41 sub write { | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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42 my ($self) = @_; | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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43 $self->processed_data()->close(); | 
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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
 
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44 } | 
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45 | 
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46 sub suffix { | 
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47 return 'xlsx'; | 
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48 } | 
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49 no Moose; | 
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50 1; | 
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51 | 
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52 __END__ | 
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53 | 
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54 =pod | 
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55 | 
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56 =encoding UTF-8 | 
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57 | 
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58 =head1 NAME | 
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59 | 
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60 CPT::Writer::Spreadsheet::XLSX | 
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61 | 
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62 =head1 VERSION | 
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63 | 
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64 version 1.99.4 | 
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65 | 
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66 =head1 AUTHOR | 
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67 | 
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68 Eric Rasche <rasche.eric@yandex.ru> | 
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69 | 
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70 =head1 COPYRIGHT AND LICENSE | 
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71 | 
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72 This software is Copyright (c) 2014 by Eric Rasche. | 
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73 | 
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74 This is free software, licensed under: | 
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75 | 
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76 The GNU General Public License, Version 3, June 2007 | 
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77 | 
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78 =cut | 
