Mercurial > repos > cpt > cpt_psm_plotter
diff lib/CPT/Plot/Class.pm @ 1:8691c1c61a8e draft default tip
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
author | cpt |
---|---|
date | Mon, 05 Jun 2023 02:48:47 +0000 |
parents | |
children |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/lib/CPT/Plot/Class.pm Mon Jun 05 02:48:47 2023 +0000 @@ -0,0 +1,70 @@ +package CPT::Plot::Class; +use Moose; +use Data::Dumper; + +# ABSTRACT: Class of objects for use in a genome map +# +has 'objects' => ( is => 'rw', isa => 'ArrayRef', default => sub { [] } ); + +# Should this class be used in calculation of partitions +has 'included' => ( is => 'rw', isa => 'Bool' ); + +has 'key' => ( is => 'rw', isa => 'Str' ); +has 'color' => ( is => 'rw', isa => 'Str' ); +has 'border' => ( is => 'rw', isa => 'Str' ); +has 'plot' => ( is => 'rw', isa => 'Bool' ); + +sub addObject { + my ( $self, $object ) = @_; + push( @{ $self->objects() }, $object ); +} + +sub getItemList { + my ($self) = @_; + my @items; + foreach ( @{ $self->objects() } ) { + push( @items, $_->getLocations() ); + } + return \@items; +} + +sub getObjects { + my ($self) = @_; + return $self->objects(); +} + +sub getMemberCount { + my ($self) = @_; + return scalar @{ $self->objects() }; +} + +no Moose; +1; + +__END__ + +=pod + +=encoding UTF-8 + +=head1 NAME + +CPT::Plot::Class - Class of objects for use in a genome map + +=head1 VERSION + +version 1.96 + +=head1 AUTHOR + +Eric Rasche <rasche.eric@yandex.ru> + +=head1 COPYRIGHT AND LICENSE + +This software is Copyright (c) 2014 by Eric Rasche. + +This is free software, licensed under: + + The GNU General Public License, Version 3, June 2007 + +=cut