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annotate lib/CPT/Chado/GMOD_Conf.pm @ 1:d724f34e671d draft default tip

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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
author cpt
date Mon, 05 Jun 2023 02:50:07 +0000
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1 package CPT::Chado::GMOD_Conf;
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2 use Moose;
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3
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4 has 'database_identifier' => ( is => 'rw', isa => 'Str' );
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5 has 'gmod_root' => ( is => 'rw', isa => 'Str', default => '/usr/share/gmod/' );
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6 has 'database' => ( is => 'rw', isa => 'Str' );
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7 has 'username' => ( is => 'rw', isa => 'Str' );
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8 has 'password' => ( is => 'rw', isa => 'Str' );
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9 has 'host' => ( is => 'rw', isa => 'Str', default => 'localhost' );
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10 has 'port' => ( is => 'rw', isa => 'Int', default => 5432 );
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11
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12 sub load_config {
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13 my ( $self, $identifier ) = @_;
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14 open( my $db_info, '<',
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15 $self->gmod_root() . "conf/${identifier}.conf" );
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16 while (<$db_info>) {
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17 chomp $_;
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18 if ( $_ =~ /DBUSER=/ ) {
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19 $self->username( substr( $_, 7 ) );
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20 }
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21 elsif ( $_ =~ /DBPASS=/ ) {
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22 $self->password( substr( $_, 7 ) );
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23 }
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24 elsif ( $_ =~ /DBNAME=/ ) {
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25 $self->database( substr( $_, 7 ) );
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26 }
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27 }
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28 close($db_info);
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29 }
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30
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31 sub get_connector {
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32 my ( $self, $identifier ) = @_;
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33 $self->load_config($identifier);
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34 use DBI;
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35 my $dbh = DBI->connect(
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36 sprintf(
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37 "dbi:Pg:dbname=%s;host=%s;port=%s;",
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38 $self->database(), $self->host(), $self->port()
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39 ),
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40 $self->username(),
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41 $self->password()
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42 );
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43 return $dbh;
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44 }
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45
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46 no Moose;
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47 1;
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48
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49 __END__
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50
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51 =pod
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52
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53 =encoding UTF-8
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54
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55 =head1 NAME
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56
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57 CPT::Chado::GMOD_Conf
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58
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59 =head1 VERSION
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60
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61 version 1.99.4
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62
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63 =head1 AUTHOR
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64
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65 Eric Rasche <rasche.eric@yandex.ru>
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66
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67 =head1 COPYRIGHT AND LICENSE
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68
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69 This software is Copyright (c) 2014 by Eric Rasche.
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70
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71 This is free software, licensed under:
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72
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73 The GNU General Public License, Version 3, June 2007
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74
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75 =cut