--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/cpt_psm_prep/lib/CPT/Analysis/PAUSE/ParsedSam.pm	Tue Jul 05 05:38:34 2022 +0000
@@ -0,0 +1,49 @@
+package CPT::Analysis::PAUSE::ParsedSam;
+
+# ABSTRACT: Library for use in PAUSE analysis
+use strict;
+use warnings;
+use Moose;
+use SVG;
+
+has 'coverage_density'               => ( is => 'rw', isa => 'ArrayRef' );
+has 'read_starts'                    => ( is => 'rw', isa => 'ArrayRef' );
+has 'read_ends'                      => ( is => 'rw', isa => 'ArrayRef' );
+has 'max'                            => ( is => 'rw', isa => 'Int' );
+has 'stats_start_max'                => ( is => 'rw', isa => 'Num' );
+has 'stats_end_max'                  => ( is => 'rw', isa => 'Num' );
+has 'stats_start_mean'               => ( is => 'rw', isa => 'Num' );
+has 'stats_end_mean'                 => ( is => 'rw', isa => 'Num' );
+has 'stats_start_standard_deviation' => ( is => 'rw', isa => 'Num' );
+has 'stats_end_standard_deviation'   => ( is => 'rw', isa => 'Num' );
+
+no Moose;
+1;
+
+__END__
+
+=pod
+
+=encoding UTF-8
+
+=head1 NAME
+
+CPT::Analysis::PAUSE::ParsedSam - Library for use in PAUSE analysis
+
+=head1 VERSION
+
+version 1.96
+
+=head1 AUTHOR
+
+Eric Rasche <rasche.eric@yandex.ru>
+
+=head1 COPYRIGHT AND LICENSE
+
+This software is Copyright (c) 2014 by Eric Rasche.
+
+This is free software, licensed under:
+
+  The GNU General Public License, Version 3, June 2007
+
+=cut