Mercurial > repos > cpt > cpt_putative_isp

comparison generate-putative-isp.xml @ 4:bc16792ecfd2 draft

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planemo upload commit ad5355b899dc8f8300c206522e2a65d49809fb73
author cpt
date Wed, 18 Sep 2024 04:25:38 +0000
parents 08499fbf8697
children 0f6659efd912
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3:08499fbf8697 4:bc16792ecfd2
2 <description>constructs a putative list of potential i-spanin from an input genomic FASTA</description> 2 <description>constructs a putative list of potential i-spanin from an input genomic FASTA</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements"> 6 <expand macro="requirements">
7 <requirement type="package" version="2019.06.08">regex</requirement>
7 </expand> 8 </expand>
8 <command detect_errors="aggressive"><![CDATA[ 9 <command detect_errors="aggressive"><![CDATA[
9 python '$__tool_directory__/generate-putative-isp.py' 10 python '$__tool_directory__/generate-putative-isp.py'
10 '$fasta_file' 11 '$fasta_file'
11 --strand '$strand' 12 --strand '$strand'