annotate cpt_rem_annotes/test-data/RemoveAnnote_Out.gff3 @ 1:b46f0c9a4679 draft

Uploaded
author cpt
date Fri, 20 May 2022 07:30:51 +0000
parents 03d27abd1dfd
children
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0
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
1 ##gff-version 3
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cpt
parents:
diff changeset
2 Pipo GenBank gene 258 566 . + 1 ID=CPT_Pipo_001;Name=CPT_Pipo_001;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
3 Pipo GenBank mRNA 273 566 . + 1 ID=CPT_Pipo_001.t01;Parent=CPT_Pipo_001;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
4 Pipo GenBank CDS 273 566 . + 1 ID=CPT_Pipo_001.p01;Name=CPT_Pipo_001;Note=detected two transmembrane domains,8782901 HHPR;Parent=CPT_Pipo_001.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
5 Pipo GenBank exon 273 566 . + 1 Parent=CPT_Pipo_001.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
6 Pipo GenBank RBS 258 261 . + 1 Name=CPT_Pipo_001;Parent=CPT_Pipo_001;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
7 Pipo GenBank gene 841 1031 . + 1 ID=CPT_Pipo_002;Name=CPT_Pipo_002;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
8 Pipo GenBank mRNA 852 1031 . + 1 ID=CPT_Pipo_002.t01;Parent=CPT_Pipo_002;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
9 Pipo GenBank CDS 852 1031 . + 1 ID=CPT_Pipo_002.p01;Name=CPT_Pipo_002;Note=4.9466e-34 [Acinetobacter phage vB_ApiP_P1];Parent=CPT_Pipo_002.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
10 Pipo GenBank exon 852 1031 . + 1 Parent=CPT_Pipo_002.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
11 Pipo GenBank RBS 841 844 . + 1 Name=CPT_Pipo_002;Parent=CPT_Pipo_002;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
12 Pipo GenBank gene 1090 1303 . + 1 ID=CPT_Pipo_003;Name=CPT_Pipo_003;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
13 Pipo GenBank mRNA 1100 1303 . + 1 ID=CPT_Pipo_003.t01;Parent=CPT_Pipo_003;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
14 Pipo GenBank CDS 1100 1303 . + 1 ID=CPT_Pipo_003.p01;Name=CPT_Pipo_003;Note=1.1538e-41[Acinetobacter phage vB_AbaP_B09_Aci08];Parent=CPT_Pipo_003.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
15 Pipo GenBank exon 1100 1303 . + 1 Parent=CPT_Pipo_003.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
16 Pipo GenBank RBS 1090 1092 . + 1 Name=CPT_Pipo_003;Parent=CPT_Pipo_003;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
17 Pipo GenBank gene 1732 1992 . + 1 ID=CPT_Pipo_004;Name=CPT_Pipo_004;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
18 Pipo GenBank mRNA 1744 1992 . + 1 ID=CPT_Pipo_004.t01;Parent=CPT_Pipo_004;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
19 Pipo GenBank CDS 1744 1992 . + 1 ID=CPT_Pipo_004.p01;Name=CPT_Pipo_004;Note=8.14463e-44 [Acinetobacter phage vB_AbaP_46-62_Aci07];Parent=CPT_Pipo_004.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
20 Pipo GenBank exon 1744 1992 . + 1 Parent=CPT_Pipo_004.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
21 Pipo GenBank RBS 1732 1736 . + 1 Name=CPT_Pipo_004;Parent=CPT_Pipo_004;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
22 Pipo GenBank gene 2008 2572 . + 1 ID=CPT_Pipo_005;Name=CPT_Pipo_005;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
23 Pipo GenBank mRNA 2021 2572 . + 1 ID=CPT_Pipo_005.t01;Parent=CPT_Pipo_005;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
24 Pipo GenBank CDS 2021 2572 . + 1 ID=CPT_Pipo_005.p01;Name=CPT_Pipo_005;Note=3.57359e-23 phiKMV NP_877442.1;Parent=CPT_Pipo_005.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
25 Pipo GenBank exon 2021 2572 . + 1 Parent=CPT_Pipo_005.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
26 Pipo GenBank RBS 2008 2010 . + 1 Name=CPT_Pipo_005;Parent=CPT_Pipo_005;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
27 Pipo GenBank gene 2564 2948 . + 1 ID=CPT_Pipo_006;Name=CPT_Pipo_006;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
28 Pipo GenBank mRNA 2574 2948 . + 1 ID=CPT_Pipo_006.t01;Parent=CPT_Pipo_006;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
29 Pipo GenBank CDS 2574 2948 . + 1 ID=CPT_Pipo_006.p01;Name=CPT_Pipo_006;Note=1.39987e-77 [Acinetobacter phage IME200],detected coil fragment;Parent=CPT_Pipo_006.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
30 Pipo GenBank exon 2574 2948 . + 1 Parent=CPT_Pipo_006.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
31 Pipo GenBank RBS 2564 2567 . + 1 Name=CPT_Pipo_006;Parent=CPT_Pipo_006;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
32 Pipo GenBank gene 2930 3052 . + 1 ID=CPT_Pipo_007;Name=CPT_Pipo_007;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
33 Pipo GenBank mRNA 2939 3052 . + 1 ID=CPT_Pipo_007.t01;Parent=CPT_Pipo_007;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
34 Pipo GenBank CDS 2939 3052 . + 1 ID=CPT_Pipo_007.p01;Name=CPT_Pipo_007;Parent=CPT_Pipo_007.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
35 Pipo GenBank exon 2939 3052 . + 1 Parent=CPT_Pipo_007.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
36 Pipo GenBank RBS 2930 2933 . + 1 Name=CPT_Pipo_007;Parent=CPT_Pipo_007;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
37 Pipo GenBank gene 3027 3263 . + 1 ID=CPT_Pipo_008;Name=CPT_Pipo_008;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
38 Pipo GenBank mRNA 3039 3263 . + 1 ID=CPT_Pipo_008.t01;Parent=CPT_Pipo_008;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
39 Pipo GenBank CDS 3039 3263 . + 1 ID=CPT_Pipo_008.p01;Name=CPT_Pipo_008;Note=2.88488e-44 [Acinetobacter phage Fri1];Parent=CPT_Pipo_008.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
40 Pipo GenBank exon 3039 3263 . + 1 Parent=CPT_Pipo_008.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
41 Pipo GenBank RBS 3027 3030 . + 1 Name=CPT_Pipo_008;Parent=CPT_Pipo_008;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
42 Pipo GenBank gene 3336 3944 . + 1 ID=CPT_Pipo_009;Name=CPT_Pipo_009;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
43 Pipo GenBank mRNA 3348 3944 . + 1 ID=CPT_Pipo_009.t01;Parent=CPT_Pipo_009;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
44 Pipo GenBank CDS 3348 3944 . + 1 ID=CPT_Pipo_009.p01;Name=CPT_Pipo_009;Note=2.06752e-145 [Acinetobacter phage vB_AbaP_B1];Parent=CPT_Pipo_009.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
45 Pipo GenBank exon 3348 3944 . + 1 Parent=CPT_Pipo_009.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
46 Pipo GenBank RBS 3336 3339 . + 1 Name=CPT_Pipo_009;Parent=CPT_Pipo_009;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
47 Pipo GenBank gene 4047 4550 . + 1 ID=CPT_Pipo_010;Name=CPT_Pipo_010;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
48 Pipo GenBank mRNA 4059 4550 . + 1 ID=CPT_Pipo_010.t01;Parent=CPT_Pipo_010;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
49 Pipo GenBank CDS 4059 4550 . + 1 ID=CPT_Pipo_010.p01;Name=CPT_Pipo_010;Note=putative DNA-binding protein;Parent=CPT_Pipo_010.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
50 Pipo GenBank exon 4059 4550 . + 1 Parent=CPT_Pipo_010.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
51 Pipo GenBank RBS 4047 4050 . + 1 Name=CPT_Pipo_010;Parent=CPT_Pipo_010;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
52 Pipo GenBank gene 4635 4779 . + 1 ID=CPT_Pipo_011;Name=CPT_Pipo_011;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
53 Pipo GenBank mRNA 4645 4779 . + 1 ID=CPT_Pipo_011.t01;Parent=CPT_Pipo_011;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
54 Pipo GenBank CDS 4645 4779 . + 1 ID=CPT_Pipo_011.p01;Name=CPT_Pipo_011;Note=3.48784e-16 [Acinetobacter phage Abp1];Parent=CPT_Pipo_011.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
55 Pipo GenBank exon 4645 4779 . + 1 Parent=CPT_Pipo_011.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
56 Pipo GenBank RBS 4635 4638 . + 1 Name=CPT_Pipo_011;Parent=CPT_Pipo_011;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
57 Pipo GenBank gene 4757 4930 . + 1 ID=CPT_Pipo_012;Name=CPT_Pipo_012;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
58 Pipo GenBank mRNA 4772 4930 . + 1 ID=CPT_Pipo_012.t01;Parent=CPT_Pipo_012;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
59 Pipo GenBank CDS 4772 4930 . + 1 ID=CPT_Pipo_012.p01;Name=CPT_Pipo_012;Note=1.10076e-24 [Acinetobacter phage vB_AbaP_D2],putative membrane protein;Parent=CPT_Pipo_012.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
60 Pipo GenBank exon 4772 4930 . + 1 Parent=CPT_Pipo_012.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
61 Pipo GenBank RBS 4757 4760 . + 1 Name=CPT_Pipo_012;Parent=CPT_Pipo_012;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
62 Pipo GenBank gene 4929 5337 . + 1 ID=CPT_Pipo_013;Name=CPT_Pipo_013;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
63 Pipo GenBank mRNA 4939 5337 . + 1 ID=CPT_Pipo_013.t01;Parent=CPT_Pipo_013;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
64 Pipo GenBank CDS 4939 5337 . + 1 ID=CPT_Pipo_013.p01;Name=CPT_Pipo_013;Note=5.08591e-94 [Acinetobacter phage vB_ApiP_P2 ];Parent=CPT_Pipo_013.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
65 Pipo GenBank exon 4939 5337 . + 1 Parent=CPT_Pipo_013.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
66 Pipo GenBank RBS 4929 4932 . + 1 Name=CPT_Pipo_013;Parent=CPT_Pipo_013;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
67 Pipo GenBank gene 5396 5887 . + 1 ID=CPT_Pipo_014;Name=CPT_Pipo_014;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
68 Pipo GenBank mRNA 5408 5887 . + 1 ID=CPT_Pipo_014.t01;Parent=CPT_Pipo_014;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
69 Pipo GenBank CDS 5408 5887 . + 1 ID=CPT_Pipo_014.p01;Name=CPT_Pipo_014;Note=8.66443e-113 Acinetobacter phage phiAB6;Parent=CPT_Pipo_014.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
70 Pipo GenBank exon 5408 5887 . + 1 Parent=CPT_Pipo_014.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
71 Pipo GenBank RBS 5396 5400 . + 1 Name=CPT_Pipo_014;Parent=CPT_Pipo_014;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
72 Pipo GenBank gene 5875 6194 . + 1 ID=CPT_Pipo_015;Name=CPT_Pipo_015;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
73 Pipo GenBank mRNA 5889 6194 . + 1 ID=CPT_Pipo_015.t01;Parent=CPT_Pipo_015;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
74 Pipo GenBank CDS 5889 6194 . + 1 ID=CPT_Pipo_015.p01;Name=CPT_Pipo_015;Note=2.41773e-33 Acinetobacter phage vB_AbaP_B1;Parent=CPT_Pipo_015.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
75 Pipo GenBank exon 5889 6194 . + 1 Parent=CPT_Pipo_015.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
76 Pipo GenBank RBS 5875 5879 . + 1 Name=CPT_Pipo_015;Parent=CPT_Pipo_015;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
77 Pipo GenBank gene 6221 6340 . + 1 ID=CPT_Pipo_016;Name=CPT_Pipo_016;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
78 Pipo GenBank mRNA 6221 6340 . + 1 ID=CPT_Pipo_016.t01;Parent=CPT_Pipo_016;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
79 Pipo GenBank CDS 6221 6340 . + 1 ID=CPT_Pipo_016.p01;Name=CPT_Pipo_016;Parent=CPT_Pipo_016.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
80 Pipo GenBank exon 6221 6340 . + 1 Parent=CPT_Pipo_016.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
81 Pipo GenBank gene 6342 6518 . + 1 ID=CPT_Pipo_017;Name=CPT_Pipo_017;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
82 Pipo GenBank mRNA 6351 6518 . + 1 ID=CPT_Pipo_017.t01;Parent=CPT_Pipo_017;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
83 Pipo GenBank CDS 6351 6518 . + 1 ID=CPT_Pipo_017.p01;Name=CPT_Pipo_017;Note=detected coil fragment,9.9476e-30 Acinetobacter phage vB_AbaP_B5;Parent=CPT_Pipo_017.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
84 Pipo GenBank exon 6351 6518 . + 1 Parent=CPT_Pipo_017.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
85 Pipo GenBank RBS 6342 6345 . + 1 Name=CPT_Pipo_017;Parent=CPT_Pipo_017;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
86 Pipo GenBank gene 6492 6696 . + 1 ID=CPT_Pipo_018;Name=CPT_Pipo_018;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
87 Pipo GenBank mRNA 6505 6696 . + 1 ID=CPT_Pipo_018.t01;Parent=CPT_Pipo_018;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
88 Pipo GenBank CDS 6505 6696 . + 1 ID=CPT_Pipo_018.p01;Name=CPT_Pipo_018;Note=4.55802e-26 Acinetobacter phage vB_AbaP_B09_Aci08;Parent=CPT_Pipo_018.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
89 Pipo GenBank exon 6505 6696 . + 1 Parent=CPT_Pipo_018.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
90 Pipo GenBank RBS 6492 6495 . + 1 Name=CPT_Pipo_018;Parent=CPT_Pipo_018;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
91 Pipo GenBank gene 6683 6923 . + 1 ID=CPT_Pipo_019;Name=CPT_Pipo_019;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
92 Pipo GenBank mRNA 6693 6923 . + 1 ID=CPT_Pipo_019.t01;Parent=CPT_Pipo_019;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
93 Pipo GenBank CDS 6693 6923 . + 1 ID=CPT_Pipo_019.p01;Name=CPT_Pipo_019;Note=8.95155e-34 [Acinetobacter phage vB_AbaP_B5];Parent=CPT_Pipo_019.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
94 Pipo GenBank exon 6693 6923 . + 1 Parent=CPT_Pipo_019.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
95 Pipo GenBank RBS 6683 6686 . + 1 Name=CPT_Pipo_019;Parent=CPT_Pipo_019;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
96 Pipo GenBank gene 6899 7137 . + 1 ID=CPT_Pipo_020;Name=CPT_Pipo_020;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
97 Pipo GenBank mRNA 6913 7137 . + 1 ID=CPT_Pipo_020.t01;Parent=CPT_Pipo_020;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
98 Pipo GenBank CDS 6913 7137 . + 1 ID=CPT_Pipo_020.p01;Name=CPT_Pipo_020;Note=2.54819e-39 [Acinetobacter phage IME200];Parent=CPT_Pipo_020.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
99 Pipo GenBank exon 6913 7137 . + 1 Parent=CPT_Pipo_020.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
100 Pipo GenBank RBS 6899 6903 . + 1 Name=CPT_Pipo_020;Parent=CPT_Pipo_020;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
101 Pipo GenBank gene 7150 7609 . + 1 ID=CPT_Pipo_021;Name=CPT_Pipo_021;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
102 Pipo GenBank mRNA 7160 7609 . + 1 ID=CPT_Pipo_021.t01;Parent=CPT_Pipo_021;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
103 Pipo GenBank CDS 7160 7609 . + 1 ID=CPT_Pipo_021.p01;Name=CPT_Pipo_021;Note=IPR003615 potential putative HNH endonuclease,[1.0895e-17 Blast to T7 NP_041994.1]and [0.00047196 blast to phage K YP_009041447.1];Parent=CPT_Pipo_021.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
104 Pipo GenBank exon 7160 7609 . + 1 Parent=CPT_Pipo_021.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
105 Pipo GenBank RBS 7150 7154 . + 1 Name=CPT_Pipo_021;Parent=CPT_Pipo_021;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
106 Pipo GenBank gene 7672 8394 . + 1 ID=CPT_Pipo_022;Name=CPT_Pipo_022;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
107 Pipo GenBank mRNA 7687 8394 . + 1 ID=CPT_Pipo_022.t01;Parent=CPT_Pipo_022;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
108 Pipo GenBank CDS 7687 8394 . + 1 ID=CPT_Pipo_022.p01;Name=CPT_Pipo_022;Note=NP_877453.1 potential putative DNA-like primase,1.71113e-21;Parent=CPT_Pipo_022.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
109 Pipo GenBank exon 7687 8394 . + 1 Parent=CPT_Pipo_022.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
110 Pipo GenBank RBS 7672 7674 . + 1 Name=CPT_Pipo_022;Parent=CPT_Pipo_022;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
111 Pipo GenBank gene 8383 8705 . + 1 ID=CPT_Pipo_023;Name=CPT_Pipo_023;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
112 Pipo GenBank mRNA 8394 8705 . + 1 ID=CPT_Pipo_023.t01;Parent=CPT_Pipo_023;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
113 Pipo GenBank CDS 8394 8705 . + 1 ID=CPT_Pipo_023.p01;Name=CPT_Pipo_023;Note=3.11975e-49 [Acinetobacter phage vB_AbaP_B09_Aci08 ];Parent=CPT_Pipo_023.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
114 Pipo GenBank exon 8394 8705 . + 1 Parent=CPT_Pipo_023.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
115 Pipo GenBank RBS 8383 8386 . + 1 Name=CPT_Pipo_023;Parent=CPT_Pipo_023;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
116 Pipo GenBank gene 8778 10086 . + 1 ID=CPT_Pipo_024;Name=CPT_Pipo_024;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
117 Pipo GenBank mRNA 8788 10086 . + 1 ID=CPT_Pipo_024.t01;Parent=CPT_Pipo_024;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
118 Pipo GenBank CDS 8788 10086 . + 1 ID=CPT_Pipo_024.p01;Name=CPT_Pipo_024;Note=3.12672e-62,NP_877454.1 [phiKMVp15];Parent=CPT_Pipo_024.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
119 Pipo GenBank exon 8788 10086 . + 1 Parent=CPT_Pipo_024.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
120 Pipo GenBank RBS 8778 8781 . + 1 Name=CPT_Pipo_024;Parent=CPT_Pipo_024;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
121 Pipo GenBank gene 10079 10826 . + 1 ID=CPT_Pipo_025;Name=CPT_Pipo_025;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
122 Pipo GenBank mRNA 10089 10826 . + 1 ID=CPT_Pipo_025.t01;Parent=CPT_Pipo_025;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
123 Pipo GenBank CDS 10089 10826 . + 1 ID=CPT_Pipo_025.p01;Name=CPT_Pipo_025;Parent=CPT_Pipo_025.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
124 Pipo GenBank exon 10089 10826 . + 1 Parent=CPT_Pipo_025.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
125 Pipo GenBank RBS 10079 10081 . + 1 Name=CPT_Pipo_025;Parent=CPT_Pipo_025;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
126 Pipo GenBank gene 10809 11794 . + 1 ID=CPT_Pipo_026;Name=CPT_Pipo_026;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
127 Pipo GenBank mRNA 10823 11794 . + 1 ID=CPT_Pipo_026.t01;Parent=CPT_Pipo_026;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
128 Pipo GenBank CDS 10823 11794 . + 1 ID=CPT_Pipo_026.p01;Name=CPT_Pipo_026;Note=2.84662e-63 NP_853585.1 PMID: 15028677,IPR012310;Parent=CPT_Pipo_026.t01;product=DNA ligase;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
129 Pipo GenBank exon 10823 11794 . + 1 Parent=CPT_Pipo_026.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
130 Pipo GenBank RBS 10809 10813 . + 1 Name=CPT_Pipo_026;Parent=CPT_Pipo_026;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
131 Pipo GenBank gene 11755 11870 . + 1 ID=CPT_Pipo_027;Name=CPT_Pipo_027;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
132 Pipo GenBank mRNA 11766 11870 . + 1 ID=CPT_Pipo_027.t01;Parent=CPT_Pipo_027;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
133 Pipo GenBank CDS 11766 11870 . + 1 ID=CPT_Pipo_027.p01;Name=CPT_Pipo_027;Note=YP_009288649.1;Parent=CPT_Pipo_027.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
134 Pipo GenBank exon 11766 11870 . + 1 Parent=CPT_Pipo_027.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
135 Pipo GenBank RBS 11755 11757 . + 1 Name=CPT_Pipo_027;Parent=CPT_Pipo_027;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
136 Pipo GenBank gene 11927 12041 . + 1 ID=CPT_Pipo_028;Name=CPT_Pipo_028;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
137 Pipo GenBank mRNA 11940 12041 . + 1 ID=CPT_Pipo_028.t01;Parent=CPT_Pipo_028;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
138 Pipo GenBank CDS 11940 12041 . + 1 ID=CPT_Pipo_028.p01;Name=CPT_Pipo_028;Note=blastp 6e-09 [Acinetobacter phage ABPK48-2];Parent=CPT_Pipo_028.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
139 Pipo GenBank exon 11940 12041 . + 1 Parent=CPT_Pipo_028.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
140 Pipo GenBank RBS 11927 11931 . + 1 Name=CPT_Pipo_028;Parent=CPT_Pipo_028;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
141 Pipo GenBank gene 12045 12500 . + 1 ID=CPT_Pipo_029;Name=CPT_Pipo_029;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
142 Pipo GenBank mRNA 12054 12500 . + 1 ID=CPT_Pipo_029.t01;Parent=CPT_Pipo_029;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
143 Pipo GenBank CDS 12054 12500 . + 1 ID=CPT_Pipo_029.p01;Name=CPT_Pipo_029;Note=0.000330846 [phageK_gp041] YP_009041447.1,IPR003615;Parent=CPT_Pipo_029.t01;product=putative HNH endonuclease;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
144 Pipo GenBank exon 12054 12500 . + 1 Parent=CPT_Pipo_029.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
145 Pipo GenBank RBS 12045 12048 . + 1 Name=CPT_Pipo_029;Parent=CPT_Pipo_029;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
146 Pipo GenBank gene 12485 14815 . + 1 ID=CPT_Pipo_030;Name=CPT_Pipo_030;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
147 Pipo GenBank mRNA 12497 14815 . + 1 ID=CPT_Pipo_030.t01;Parent=CPT_Pipo_030;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
148 Pipo GenBank CDS 12497 14815 . + 1 ID=CPT_Pipo_030.p01;Name=CPT_Pipo_030;Note=IPR001098,score%3D0 [phiKMVp19];Parent=CPT_Pipo_030.t01;product=putative DNA directed DNA polymerase;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
149 Pipo GenBank exon 12497 14815 . + 1 Parent=CPT_Pipo_030.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
150 Pipo GenBank RBS 12485 12488 . + 1 Name=CPT_Pipo_030;Parent=CPT_Pipo_030;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
151 Pipo GenBank gene 14794 15038 . + 1 ID=CPT_Pipo_031;Name=CPT_Pipo_031;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
152 Pipo GenBank mRNA 14805 15038 . + 1 ID=CPT_Pipo_031.t01;Parent=CPT_Pipo_031;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
153 Pipo GenBank CDS 14805 15038 . + 1 ID=CPT_Pipo_031.p01;Name=CPT_Pipo_031;Note=1.07353e-42 [Acinetobacter phage Fri1];Parent=CPT_Pipo_031.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
154 Pipo GenBank exon 14805 15038 . + 1 Parent=CPT_Pipo_031.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
155 Pipo GenBank RBS 14794 14796 . + 1 Name=CPT_Pipo_031;Parent=CPT_Pipo_031;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
156 Pipo GenBank gene 15023 15925 . + 1 ID=CPT_Pipo_032;Name=CPT_Pipo_032;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
157 Pipo GenBank mRNA 15035 15925 . + 1 ID=CPT_Pipo_032.t01;Parent=CPT_Pipo_032;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
158 Pipo GenBank CDS 15035 15925 . + 1 ID=CPT_Pipo_032.p01;Name=CPT_Pipo_032;Note=1.95456e-38 [phiKMVp21],contains membrane domain in the extracellular region.;Parent=CPT_Pipo_032.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
159 Pipo GenBank exon 15035 15925 . + 1 Parent=CPT_Pipo_032.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
160 Pipo GenBank RBS 15023 15027 . + 1 Name=CPT_Pipo_032;Parent=CPT_Pipo_032;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
161 Pipo GenBank gene 15972 16101 . + 1 ID=CPT_Pipo_033;Name=CPT_Pipo_033;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
162 Pipo GenBank mRNA 15982 16101 . + 1 ID=CPT_Pipo_033.t01;Parent=CPT_Pipo_033;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
163 Pipo GenBank CDS 15982 16101 . + 1 ID=CPT_Pipo_033.p01;Name=CPT_Pipo_033;Note=3.59438e-20 [Acinetobacter phage Abp1],PubMed: 24153188,hhpred ID: 9162599 HHPR,potential ATPase-dependent domain;Parent=CPT_Pipo_033.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
164 Pipo GenBank exon 15982 16101 . + 1 Parent=CPT_Pipo_033.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
165 Pipo GenBank RBS 15972 15976 . + 1 Name=CPT_Pipo_033;Parent=CPT_Pipo_033;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
166 Pipo GenBank gene 16123 17087 . + 1 ID=CPT_Pipo_034;Name=CPT_Pipo_034;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
167 Pipo GenBank mRNA 16134 17087 . + 1 ID=CPT_Pipo_034.t01;Parent=CPT_Pipo_034;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
168 Pipo GenBank CDS 16134 17087 . + 1 ID=CPT_Pipo_034.p01;Name=CPT_Pipo_034;Note=1.21811e-55 [phiKMVp22 protein];Parent=CPT_Pipo_034.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
169 Pipo GenBank exon 16134 17087 . + 1 Parent=CPT_Pipo_034.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
170 Pipo GenBank RBS 16123 16126 . + 1 Name=CPT_Pipo_034;Parent=CPT_Pipo_034;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
171 Pipo GenBank gene 17064 17646 . + 1 ID=CPT_Pipo_035;Name=CPT_Pipo_035;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
172 Pipo GenBank mRNA 17077 17646 . + 1 ID=CPT_Pipo_035.t01;Parent=CPT_Pipo_035;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
173 Pipo GenBank CDS 17077 17646 . + 1 ID=CPT_Pipo_035.p01;Name=CPT_Pipo_035;Note=1.49572e-124 [Acinetobacter phage vB_AbaP_B09_Aci08],hhpred ID: 9993830 HHPR hits: 3H38_A%2C 1MIW_A%2C 3AQL_B,potential putative tRNA nucleotidyl transferase-related protein;Parent=CPT_Pipo_035.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
174 Pipo GenBank exon 17077 17646 . + 1 Parent=CPT_Pipo_035.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
175 Pipo GenBank RBS 17064 17067 . + 1 Name=CPT_Pipo_035;Parent=CPT_Pipo_035;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
176 Pipo GenBank gene 17630 18083 . + 1 ID=CPT_Pipo_036;Name=CPT_Pipo_036;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
177 Pipo GenBank mRNA 17643 18083 . + 1 ID=CPT_Pipo_036.t01;Parent=CPT_Pipo_036;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
178 Pipo GenBank CDS 17643 18083 . + 1 ID=CPT_Pipo_036.p01;Name=CPT_Pipo_036;Note=6.07803e-35,NP_877462.1[Pseudomonas phage phiKMV],IPR004211;Parent=CPT_Pipo_036.t01;product=putative DNA endonuclease VII;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
179 Pipo GenBank exon 17643 18083 . + 1 Parent=CPT_Pipo_036.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
180 Pipo GenBank RBS 17630 17632 . + 1 Name=CPT_Pipo_036;Parent=CPT_Pipo_036;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
181 Pipo GenBank gene 18074 19022 . + 1 ID=CPT_Pipo_037;Name=CPT_Pipo_037;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
182 Pipo GenBank mRNA 18087 19022 . + 1 ID=CPT_Pipo_037.t01;Parent=CPT_Pipo_037;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
183 Pipo GenBank CDS 18087 19022 . + 1 ID=CPT_Pipo_037.p01;Name=CPT_Pipo_037;Note=InterPro:IPR004843,Metallo-dependent phosphatase-like;Parent=CPT_Pipo_037.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
184 Pipo GenBank exon 18087 19022 . + 1 Parent=CPT_Pipo_037.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
185 Pipo GenBank RBS 18074 18077 . + 1 Name=CPT_Pipo_037;Parent=CPT_Pipo_037;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
186 Pipo GenBank gene 19007 19672 . + 1 ID=CPT_Pipo_038;Name=CPT_Pipo_038;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
187 Pipo GenBank mRNA 19022 19672 . + 1 ID=CPT_Pipo_038.t01;Parent=CPT_Pipo_038;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
188 Pipo GenBank CDS 19022 19672 . + 1 ID=CPT_Pipo_038.p01;Name=CPT_Pipo_038;Note=2.64031e-7,NP_944963.1,InterPro:IPR027417;Parent=CPT_Pipo_038.t01;product=deoxynucleotide monophosphate kinase;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
189 Pipo GenBank exon 19022 19672 . + 1 Parent=CPT_Pipo_038.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
190 Pipo GenBank RBS 19007 19011 . + 1 Name=CPT_Pipo_038;Parent=CPT_Pipo_038;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
191 Pipo GenBank gene 19671 22098 . + 1 ID=CPT_Pipo_039;Name=CPT_Pipo_039;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
192 Pipo GenBank mRNA 19681 22098 . + 1 ID=CPT_Pipo_039.t01;Parent=CPT_Pipo_039;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
193 Pipo GenBank CDS 19681 22098 . + 1 ID=CPT_Pipo_039.p01;Name=CPT_Pipo_039;Note=3.40462e-76 NP_041960.1,IPR002092,T7-like RNA polymerase;Parent=CPT_Pipo_039.t01;product=RNA polymerase;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
194 Pipo GenBank exon 19681 22098 . + 1 Parent=CPT_Pipo_039.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
195 Pipo GenBank RBS 19671 19675 . + 1 Name=CPT_Pipo_039;Parent=CPT_Pipo_039;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
196 Pipo GenBank gene 22190 22399 . + 1 ID=CPT_Pipo_040;Name=CPT_Pipo_040;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
197 Pipo GenBank mRNA 22202 22399 . + 1 ID=CPT_Pipo_040.t01;Parent=CPT_Pipo_040;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
198 Pipo GenBank CDS 22202 22399 . + 1 ID=CPT_Pipo_040.p01;Name=CPT_Pipo_040;Note=1.62918e-40 [Acinetobacter phage vB_AbaP_AS11];Parent=CPT_Pipo_040.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
199 Pipo GenBank exon 22202 22399 . + 1 Parent=CPT_Pipo_040.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
200 Pipo GenBank RBS 22190 22194 . + 1 Name=CPT_Pipo_040;Parent=CPT_Pipo_040;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
201 Pipo GenBank gene 22383 22647 . + 1 ID=CPT_Pipo_041;Name=CPT_Pipo_041;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
202 Pipo GenBank mRNA 22396 22647 . + 1 ID=CPT_Pipo_041.t01;Parent=CPT_Pipo_041;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
203 Pipo GenBank CDS 22396 22647 . + 1 ID=CPT_Pipo_041.p01;Name=CPT_Pipo_041;Note=6.15327e-54 blast to [Acinetobacter phage vB_AbaP_B09_Aci08];Parent=CPT_Pipo_041.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
204 Pipo GenBank exon 22396 22647 . + 1 Parent=CPT_Pipo_041.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
205 Pipo GenBank RBS 22383 22387 . + 1 Name=CPT_Pipo_041;Parent=CPT_Pipo_041;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
206 Pipo GenBank gene 22646 24212 . + 1 ID=CPT_Pipo_042;Name=CPT_Pipo_042;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
207 Pipo GenBank mRNA 22656 24212 . + 1 ID=CPT_Pipo_042.t01;Parent=CPT_Pipo_042;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
208 Pipo GenBank CDS 22656 24212 . + 1 ID=CPT_Pipo_042.p01;Name=CPT_Pipo_042;Note=InterPro:IPR020991,2.31306e-51 NP_041995.1[bacteriophage T7];Parent=CPT_Pipo_042.t01;product=head-tail connector protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
209 Pipo GenBank exon 22656 24212 . + 1 Parent=CPT_Pipo_042.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
210 Pipo GenBank RBS 22646 22650 . + 1 Name=CPT_Pipo_042;Parent=CPT_Pipo_042;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
211 Pipo GenBank gene 24211 25081 . + 1 ID=CPT_Pipo_043;Name=CPT_Pipo_043;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
212 Pipo GenBank mRNA 24221 25081 . + 1 ID=CPT_Pipo_043.t01;Parent=CPT_Pipo_043;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
213 Pipo GenBank CDS 24221 25081 . + 1 ID=CPT_Pipo_043.p01;Name=CPT_Pipo_043;Note=score%3D0 blast to [Acinetobacter phage vB_AbaP_B3];Parent=CPT_Pipo_043.t01;product=putative scaffolding protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
214 Pipo GenBank exon 24221 25081 . + 1 Parent=CPT_Pipo_043.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
215 Pipo GenBank RBS 24211 24215 . + 1 Name=CPT_Pipo_043;Parent=CPT_Pipo_043;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
216 Pipo GenBank gene 25083 26128 . + 1 ID=CPT_Pipo_044;Name=CPT_Pipo_044;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
217 Pipo GenBank mRNA 25097 26128 . + 1 ID=CPT_Pipo_044.t01;Parent=CPT_Pipo_044;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
218 Pipo GenBank CDS 25097 26128 . + 1 ID=CPT_Pipo_044.p01;Name=CPT_Pipo_044;Note=1.92669e-49 NP_877471.1 [phiKMV] PMID: 16436440,Q7Y2D3;Parent=CPT_Pipo_044.t01;product=major capsid protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
219 Pipo GenBank exon 25097 26128 . + 1 Parent=CPT_Pipo_044.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
220 Pipo GenBank RBS 25083 25087 . + 1 Name=CPT_Pipo_044;Parent=CPT_Pipo_044;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
221 Pipo GenBank gene 26170 26369 . + 1 ID=CPT_Pipo_045;Name=CPT_Pipo_045;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
222 Pipo GenBank mRNA 26184 26369 . + 1 ID=CPT_Pipo_045.t01;Parent=CPT_Pipo_045;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
223 Pipo GenBank CDS 26184 26369 . + 1 ID=CPT_Pipo_045.p01;Name=CPT_Pipo_045;Note=detected coil segment,PMID: 20816983,hhpred ID: 1724640 HHPR pdb: 2XDJ;Parent=CPT_Pipo_045.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
224 Pipo GenBank exon 26184 26369 . + 1 Parent=CPT_Pipo_045.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
225 Pipo GenBank RBS 26170 26174 . + 1 Name=CPT_Pipo_045;Parent=CPT_Pipo_045;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
226 Pipo GenBank gene 26371 26674 . + 1 ID=CPT_Pipo_046;Name=CPT_Pipo_046;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
227 Pipo GenBank mRNA 26381 26674 . + 1 ID=CPT_Pipo_046.t01;Parent=CPT_Pipo_046;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
228 Pipo GenBank CDS 26381 26674 . + 1 ID=CPT_Pipo_046.p01;Name=CPT_Pipo_046;Note=potential tail needle. hhpred ID number: 3392758 HHPR pdb hit: 4ZXQ,PMID: 26574546;Parent=CPT_Pipo_046.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
229 Pipo GenBank exon 26381 26674 . + 1 Parent=CPT_Pipo_046.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
230 Pipo GenBank RBS 26371 26375 . + 1 Name=CPT_Pipo_046;Parent=CPT_Pipo_046;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
231 Pipo GenBank gene 26730 27372 . + 1 ID=CPT_Pipo_047;Name=CPT_Pipo_047;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
232 Pipo GenBank mRNA 26746 27372 . + 1 ID=CPT_Pipo_047.t01;Parent=CPT_Pipo_047;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
233 Pipo GenBank CDS 26746 27372 . + 1 ID=CPT_Pipo_047.p01;Name=CPT_Pipo_047;Note=InterPro:IPR033767 tail tubular protein gp11,1.20181e-16 NP_877472.1;Parent=CPT_Pipo_047.t01;product=tail tubular protein A;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
234 Pipo GenBank exon 26746 27372 . + 1 Parent=CPT_Pipo_047.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
235 Pipo GenBank RBS 26730 26733 . + 1 Name=CPT_Pipo_047;Parent=CPT_Pipo_047;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
236 Pipo GenBank gene 27371 29672 . + 1 ID=CPT_Pipo_048;Name=CPT_Pipo_048;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
237 Pipo GenBank mRNA 27381 29672 . + 1 ID=CPT_Pipo_048.t01;Parent=CPT_Pipo_048;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
238 Pipo GenBank CDS 27381 29672 . + 1 ID=CPT_Pipo_048.p01;Name=CPT_Pipo_048;Note=7.22201e-87 phiKMV;Parent=CPT_Pipo_048.t01;product=tail tubular protein B;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
239 Pipo GenBank exon 27381 29672 . + 1 Parent=CPT_Pipo_048.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
240 Pipo GenBank RBS 27371 27375 . + 1 Name=CPT_Pipo_048;Parent=CPT_Pipo_048;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
241 Pipo GenBank gene 29659 30343 . + 1 ID=CPT_Pipo_049;Name=CPT_Pipo_049;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
242 Pipo GenBank mRNA 29672 30343 . + 1 ID=CPT_Pipo_049.t01;Parent=CPT_Pipo_049;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
243 Pipo GenBank CDS 29672 30343 . + 1 ID=CPT_Pipo_049.p01;Name=CPT_Pipo_049;Note=7.47139e-159 [Acinetobacter phage IME200];Parent=CPT_Pipo_049.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
244 Pipo GenBank exon 29672 30343 . + 1 Parent=CPT_Pipo_049.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
245 Pipo GenBank RBS 29659 29662 . + 1 Name=CPT_Pipo_049;Parent=CPT_Pipo_049;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
246 Pipo GenBank gene 30347 33241 . + 1 ID=CPT_Pipo_050;Name=CPT_Pipo_050;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
247 Pipo GenBank mRNA 30356 33241 . + 1 ID=CPT_Pipo_050.t01;Parent=CPT_Pipo_050;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
248 Pipo GenBank CDS 30356 33241 . + 1 ID=CPT_Pipo_050.p01;Name=CPT_Pipo_050;Note=1.5824e-89 [Acinetobacter phage AB3];Parent=CPT_Pipo_050.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
249 Pipo GenBank exon 30356 33241 . + 1 Parent=CPT_Pipo_050.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
250 Pipo GenBank RBS 30347 30351 . + 1 Name=CPT_Pipo_050;Parent=CPT_Pipo_050;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
251 Pipo GenBank gene 33240 36349 . + 1 ID=CPT_Pipo_051;Name=CPT_Pipo_051;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
252 Pipo GenBank mRNA 33251 36349 . + 1 ID=CPT_Pipo_051.t01;Parent=CPT_Pipo_051;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
253 Pipo GenBank CDS 33251 36349 . + 1 ID=CPT_Pipo_051.p01;Name=CPT_Pipo_051;Note=putative membrane protein,blast to phiKMV with score %3D7.0935e-9;Parent=CPT_Pipo_051.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
254 Pipo GenBank exon 33251 36349 . + 1 Parent=CPT_Pipo_051.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
255 Pipo GenBank RBS 33240 33245 . + 1 Name=CPT_Pipo_051;Parent=CPT_Pipo_051;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
256 Pipo GenBank gene 36341 38392 . + 1 ID=CPT_Pipo_052;Name=CPT_Pipo_052;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
257 Pipo GenBank mRNA 36356 38392 . + 1 ID=CPT_Pipo_052.t01;Parent=CPT_Pipo_052;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
258 Pipo GenBank CDS 36356 38392 . + 1 ID=CPT_Pipo_052.p01;Name=CPT_Pipo_052;Note=potential tail fiber/tail spike,5924656 HHPR hit 5JS4_C%3B 6EU4_C%3B 5W5P (To be published by Leiman),PMID: 28209973;Parent=CPT_Pipo_052.t01;product=tailspike protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
259 Pipo GenBank exon 36356 38392 . + 1 Parent=CPT_Pipo_052.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
260 Pipo GenBank RBS 36341 36344 . + 1 Name=CPT_Pipo_052;Parent=CPT_Pipo_052;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
261 Pipo GenBank gene 38392 38737 . + 1 ID=CPT_Pipo_053;Name=CPT_Pipo_053;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
262 Pipo GenBank mRNA 38402 38737 . + 1 ID=CPT_Pipo_053.t01;Parent=CPT_Pipo_053;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
263 Pipo GenBank CDS 38402 38737 . + 1 ID=CPT_Pipo_053.p01;Name=CPT_Pipo_053;Note=7.76278e-74,IPR006481,detected three transmembrane domains;Parent=CPT_Pipo_053.t01;product=holin;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
264 Pipo GenBank exon 38402 38737 . + 1 Parent=CPT_Pipo_053.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
265 Pipo GenBank RBS 38392 38396 . + 1 Name=CPT_Pipo_053;Parent=CPT_Pipo_053;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
266 Pipo GenBank gene 38715 39281 . + 1 ID=CPT_Pipo_054;Name=CPT_Pipo_054;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
267 Pipo GenBank mRNA 38724 39281 . + 1 ID=CPT_Pipo_054.t01;Parent=CPT_Pipo_054;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
268 Pipo GenBank CDS 38724 39281 . + 1 ID=CPT_Pipo_054.p01;Name=CPT_Pipo_054;Note=IPR023346 1.63e-19,Random endo-hydrolysis of N-acetyl-beta-D-glucosaminide (1->4)-beta-linkages in chitin and chitodextrins.;Parent=CPT_Pipo_054.t01;product=endolysin;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
269 Pipo GenBank exon 38724 39281 . + 1 Parent=CPT_Pipo_054.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
270 Pipo GenBank RBS 38715 38718 . + 1 Name=CPT_Pipo_054;Parent=CPT_Pipo_054;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
271 Pipo GenBank gene 39280 39598 . + 1 ID=CPT_Pipo_055;Name=CPT_Pipo_055;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
272 Pipo GenBank mRNA 39290 39598 . + 1 ID=CPT_Pipo_055.t01;Parent=CPT_Pipo_055;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
273 Pipo GenBank CDS 39290 39598 . + 1 ID=CPT_Pipo_055.p01;Name=CPT_Pipo_055;Note=1.10536e-8 [phiKMV];Parent=CPT_Pipo_055.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
274 Pipo GenBank exon 39290 39598 . + 1 Parent=CPT_Pipo_055.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
275 Pipo GenBank RBS 39280 39284 . + 1 Name=CPT_Pipo_055;Parent=CPT_Pipo_055;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
276 Pipo GenBank gene 39598 41545 . + 1 ID=CPT_Pipo_056;Name=CPT_Pipo_056;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
277 Pipo GenBank mRNA 39608 41545 . + 1 ID=CPT_Pipo_056.t01;Parent=CPT_Pipo_056;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
278 Pipo GenBank CDS 39608 41545 . + 1 ID=CPT_Pipo_056.p01;Name=CPT_Pipo_056;Note=4.73143e-112,probably DNA maturase B phiKMV;Parent=CPT_Pipo_056.t01;product=large terminase subunit;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
279 Pipo GenBank exon 39608 41545 . + 1 Parent=CPT_Pipo_056.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
280 Pipo GenBank RBS 39598 39602 . + 1 Name=CPT_Pipo_056;Parent=CPT_Pipo_056;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
281 Pipo GenBank gene 41528 41676 . + 1 ID=CPT_Pipo_057;Name=CPT_Pipo_057;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
282 Pipo GenBank mRNA 41542 41676 . + 1 ID=CPT_Pipo_057.t01;Parent=CPT_Pipo_057;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
283 Pipo GenBank CDS 41542 41676 . + 1 ID=CPT_Pipo_057.p01;Name=CPT_Pipo_057;Note=1.21677e-21 Acinetobacter phage vB_AbaP_B3;Parent=CPT_Pipo_057.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
284 Pipo GenBank exon 41542 41676 . + 1 Parent=CPT_Pipo_057.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
285 Pipo GenBank RBS 41528 41533 . + 1 Name=CPT_Pipo_057;Parent=CPT_Pipo_057;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
286 Pipo GenBank gene 41624 41839 . + 1 ID=CPT_Pipo_058;Name=CPT_Pipo_058;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
287 Pipo GenBank mRNA 41636 41839 . + 1 ID=CPT_Pipo_058.t01;Parent=CPT_Pipo_058;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
288 Pipo GenBank CDS 41636 41839 . + 1 ID=CPT_Pipo_058.p01;Name=CPT_Pipo_058;Note=1.12427e-36,Acinetobacter phage vB_AbaP_B5;Parent=CPT_Pipo_058.t01;product=hypothetical protein;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
289 Pipo GenBank exon 41636 41839 . + 1 Parent=CPT_Pipo_058.t01;
03d27abd1dfd Uploaded
cpt
parents:
diff changeset
290 Pipo GenBank RBS 41624 41628 . + 1 Name=CPT_Pipo_058;Parent=CPT_Pipo_058;