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comparison data/attic/lysis-family.json @ 1:6e3a843b6304 draft

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planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
author cpt
date Mon, 05 Jun 2023 02:53:18 +0000
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0:bd2ff2c7e806 1:6e3a843b6304
1 {
2 "endolysins": [
3 "lysozyme",
4 "endolysin",
5 "lysin",
6 "amidase",
7 "muramidase",
8 "muraminidase",
9 "glycosidase",
10 "endopeptidase",
11 "carboxypeptidase",
12 "muralytic",
13 "glycosylase",
14 "chitinase"
15 ],
16 "holins": [
17 "holin",
18 "antiholin",
19 "hole",
20 "pinholin",
21 "lysis (protein)"
22 ],
23 "ECDs": [
24 "Glyco_hydro_19",
25 "Glyco_hydro_25",
26 "Glyco_hydro_108",
27 "Chitinase",
28 "soluble lytic transglycosylase",
29 "Transglycosylase",
30 "Glucosaminidase",
31 "Amidase02_C",
32 "Amidase_5",
33 "Amidase_3",
34 "Amidase_2",
35 "NlpD",
36 "VanY",
37 "Peptidase_U40",
38 "Peptidase_M15_3",
39 "Peptidase_M15_4",
40 "Peptidase_M23",
41 "YkuD",
42 "NLPC_P60",
43 "Peptidase_C39_2",
44 "CHAP",
45 "DUF3597"
46 ],
47 "ECDs_accro": [
48 "GH19",
49 "GH25",
50 "GH108",
51 "GyH",
52 "SLT",
53 "TRANG",
54 "GLUCO",
55 "AMIO2-C",
56 "AMI-5",
57 "AMI-3",
58 "AMI-2",
59 "NLPD",
60 "VANY",
61 "PET-U40",
62 "PET-15-3",
63 "PET-15-4",
64 "PET-M23",
65 "YKUD",
66 "NLPC-P60",
67 "PET-C39-2",
68 "CHAP",
69 "DUF"
70 ],
71 "CBDs": [
72 "PG_binding_3",
73 "LysM",
74 "SH3_3",
75 "SH3_5",
76 "PG_binding_1",
77 "ChW",
78 "ChW",
79 "Cpl-7",
80 "LGFP",
81 "SH3-related",
82 "FOG",
83 "SH3b",
84 "SPOR",
85 "SLAP"
86 ],
87 "CBDs_accro": [
88 "PG-3",
89 "LYSM",
90 "SH3-3",
91 "SH3-5",
92 "PG-1",
93 "CHW",
94 "CHW",
95 "CPL7",
96 "LGFP",
97 "SH3-r",
98 "FOG",
99 "SH3b",
100 "SPOR",
101 "SLAP"
102 ]
103 }