Mercurial > repos > cpt > cpt_shinefind

view cpt-macros.xml @ 6:6a5aac2a4c89 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit 2cfd584e61b7cb11b89d898c9883adcb54f43365
author cpt
date Tue, 25 Jul 2023 03:05:55 +0000
parents 5004ddb62700
children
line wrap: on
line source

<macros>
    <xml name="gff_requirements">
        <requirements>
            <requirement type="package" version="2.7">python</requirement>
            <requirement type="package" version="1.65">biopython</requirement>
            <requirement type="package" version="2.12.1">requests</requirement>
			<requirement type="package" version="1.2.2">cpt_gffparser</requirement>
            <yield/>
        </requirements>
        <version_command>
		<![CDATA[
			cd '$__tool_directory__' && git rev-parse HEAD
		]]>
		</version_command>
    </xml>
    <xml name="citation/mijalisrasche">
        <citation type="doi">10.1371/journal.pcbi.1008214</citation>
        <citation type="bibtex">@unpublished{galaxyTools,
		author = {E. Mijalis, H. Rasche},
		title = {CPT Galaxy Tools},
		year = {2013-2017},
		note = {https://github.com/tamu-cpt/galaxy-tools/}
		}
		</citation>
    </xml>
    <xml name="citations">
        <citations>
            <citation type="doi">10.1371/journal.pcbi.1008214</citation>
            <citation type="bibtex">
			@unpublished{galaxyTools,
				author = {E. Mijalis, H. Rasche},
				title = {CPT Galaxy Tools},
				year = {2013-2017},
				note = {https://github.com/tamu-cpt/galaxy-tools/}
			}
			</citation>
            <yield/>
        </citations>
    </xml>
    <xml name="citations-crr">
        <citations>
            <citation type="doi">10.1371/journal.pcbi.1008214</citation>
            <citation type="bibtex">
			@unpublished{galaxyTools,
				author = {C. Ross},
				title = {CPT Galaxy Tools},
				year = {2020-},
				note = {https://github.com/tamu-cpt/galaxy-tools/}
			}
			</citation>
            <yield/>
        </citations>
    </xml>
    <xml name="citations-2020">
        <citations>
            <citation type="doi">10.1371/journal.pcbi.1008214</citation>
            <citation type="bibtex">
			@unpublished{galaxyTools,
				author = {E. Mijalis, H. Rasche},
				title = {CPT Galaxy Tools},
				year = {2013-2017},
				note = {https://github.com/tamu-cpt/galaxy-tools/}
			}
			</citation>
            <citation type="bibtex">
			@unpublished{galaxyTools,
				author = {A. Criscione},
				title = {CPT Galaxy Tools},
				year = {2019-2021},
				note = {https://github.com/tamu-cpt/galaxy-tools/}
			}
                        </citation>
            <yield/>
        </citations>
    </xml>
    <xml name="citations-2020-AJC-solo">
        <citations>
            <citation type="doi">10.1371/journal.pcbi.1008214</citation>
            <citation type="bibtex">
			@unpublished{galaxyTools,
				author = {A. Criscione},
				title = {CPT Galaxy Tools},
				year = {2019-2021},
				note = {https://github.com/tamu-cpt/galaxy-tools/}
			}
                        </citation>
            <yield/>
        </citations>
    </xml>
    <xml name="citations-clm">
        <citations>
            <citation type="doi">10.1371/journal.pcbi.1008214</citation>
            <citation type="bibtex">
			@unpublished{galaxyTools,
				author = {C. Maughmer},
				title = {CPT Galaxy Tools},
				year = {2017-2020},
				note = {https://github.com/tamu-cpt/galaxy-tools/}
			}
			</citation>
            <yield/>
        </citations>
    </xml>
    <xml name="sl-citations-clm">
        <citation type="bibtex">
			@unpublished{galaxyTools,
				author = {C. Maughmer},
				title = {CPT Galaxy Tools},
				year = {2017-2020},
				note = {https://github.com/tamu-cpt/galaxy-tools/}
			}
			</citation>
        <yield/>
    </xml>
</macros>