Mercurial > repos > crs4 > blat
diff test-data/outputtest1.txt @ 1:c4ad58c4bc7d draft
Add version_command element.
Add test case from Joachim Jacob's blat wrapper: http://testtoolshed.g2.bx.psu.edu/view/joachim-jacob/blat .
Add readme section to tool_dependencies.xml .
| author | crs4 |
|---|---|
| date | Mon, 28 Oct 2013 12:40:29 -0400 |
| parents | |
| children |
line wrap: on
line diff
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/outputtest1.txt Mon Oct 28 12:40:29 2013 -0400 @@ -0,0 +1,26 @@ +OR83b ENA|CAKG01028373|CAKG01028373.1 91.94 521 42 0 2858 3378 822 302 5.6e-258 886.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 92.99 314 22 0 2480 2793 1425 1112 2.2e-152 535.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 91.38 116 8 1 22 135 4691 4576 1.6e-46 184.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 81.12 143 27 0 634 776 4064 3922 5.7e-45 178.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 89.57 115 7 2 1388 1501 2884 2774 3.0e-43 173.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 83.81 105 17 0 1879 1983 2416 2312 3.4e-36 149.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 96.49 57 2 0 1628 1684 2656 2600 6.6e-23 105.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 87.01 77 7 3 469 543 4226 4151 7.7e-21 98.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 94.55 55 2 1 1806 1859 2478 2424 5.0e-19 92.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 76.00 100 18 2 2003 2101 2297 2203 1.0e-18 91.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 97.30 37 1 0 1751 1787 2534 2498 1.7e-11 67.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 93.55 31 2 0 2309 2339 1614 1584 2.2e-06 50.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 92.59 27 2 0 2420 2446 1479 1453 6.0e-05 46.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 89.66 29 3 0 199 227 4483 4455 1.1e-04 45.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 91.30 23 2 0 1710 1732 2577 2555 3.7e-03 40.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 100.00 19 0 0 1537 1555 2731 2713 1.2e-02 38.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 95.00 20 1 0 1594 1613 2692 2673 2.1e-02 37.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 95.83 24 0 1 1321 1344 2947 2925 5.2e-02 36.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 100.00 18 0 0 1240 1257 3024 3007 1.1e-01 35.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 94.74 19 1 0 1293 1311 2976 2958 1.7e-01 34.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 95.00 20 1 0 162 181 4519 4500 1.8e-01 34.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 94.12 17 1 0 449 465 4245 4229 3.3e+00 30.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 100.00 13 0 0 2287 2299 1629 1617 1.0e+02 25.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 94.12 17 0 1 1271 1286 2997 2981 5.7e+02 22.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 92.31 13 1 0 2448 2460 1450 1438 2.1e+03 20.0 +OR83b ENA|CAKG01028373|CAKG01028373.1 100.00 10 0 0 1693 1702 2593 2584 3.0e+03 20.0