Mercurial > repos > crs4 > exomedepth

diff exomedepth.R @ 7:45af4a9748cf draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/exomedepth commit 91a0182476a7fc26be7bef1677790518c4e88348"
author iuc
date Fri, 08 Nov 2019 13:25:44 -0500
parents 9ccde1867fbb
children 5d60331757d3
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--- a/exomedepth.R	Mon Jun 11 09:34:25 2018 -0400
+++ b/exomedepth.R	Fri Nov 08 13:25:44 2019 -0500
@@ -3,8 +3,7 @@
 
 # Import parameters from xml wrapper (args_file)
 args  <- commandArgs(trailingOnly=TRUE)
-eval(parse(text=args[[1]]))
-param <- read.table(mypars,sep="=", as.is=TRUE)
+param <- read.table(args[1],sep="=", as.is=TRUE)
 
 # Set common parameters
 target      <- param[match("target",param[,1]),2]