Mercurial > repos > crs4 > kggseq_variant_selection

comparison kggseq_variant_selection.xml @ 2:e1a21c2f4997 draft

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Fix optional flag
author crs4
date Tue, 28 Apr 2015 12:35:35 -0400
parents e9758eee6697
children c758125c56d8
comparison
equal deleted inserted replaced
1:e9758eee6697 2:e1a21c2f4997
341 <param name="add_annotations_select" type="select" label="Add annotations?"> 341 <param name="add_annotations_select" type="select" label="Add annotations?">
342 <option value="yes">Yes</option> 342 <option value="yes">Yes</option>
343 <option value="no" selected="true">No</option> 343 <option value="no" selected="true">No</option>
344 </param> 344 </param>
345 <when value="yes"> 345 <when value="yes">
346 <param name="o_flanking_seq" type="integer" value="" label="Size in bp of flanking sequence to extract (--o-flanking-seq)" /> 346 <param name="o_flanking_seq" type="integer" value="" optional="true" label="Size in bp of flanking sequence to extract (--o-flanking-seq)" />
347 <param name="genome_annotation" type="boolean" truevalue="--genome-annot" falsevalue="" checked="true" label="Add genomic functional annotations (presudogenes, TFBS, enhancer, UniProt) (--genome-annot)" /> 347 <param name="genome_annotation" type="boolean" truevalue="--genome-annot" falsevalue="" checked="true" label="Add genomic functional annotations (presudogenes, TFBS, enhancer, UniProt) (--genome-annot)" />
348 <param name="omim_annotation" type="boolean" truevalue="--omim-annot" falsevalue="" checked="true" label="Add OMIM annotation (--omim-annot)" /> 348 <param name="omim_annotation" type="boolean" truevalue="--omim-annot" falsevalue="" checked="true" label="Add OMIM annotation (--omim-annot)" />
349 <param name="cosmic_annotation" type="boolean" truevalue="--cosmic-annot" falsevalue="" checked="true" label="Add COSMIC annotation (--cosmic-annot)" /> 349 <param name="cosmic_annotation" type="boolean" truevalue="--cosmic-annot" falsevalue="" checked="true" label="Add COSMIC annotation (--cosmic-annot)" />
350 <param name="pubmed_type" type="select" label="Text mining in PubMed: find co-mentions of the search terms specified below with"> 350 <param name="pubmed_type" type="select" label="Text mining in PubMed: find co-mentions of the search terms specified below with">
351 <option value="--pubmed-mining">The cytogenetic position of each variant (--pubmed-mining)</option> 351 <option value="--pubmed-mining">The cytogenetic position of each variant (--pubmed-mining)</option>