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comparison tool_dependencies.xml @ 2:208ce57f9221 draft default tip

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Fix version for blat requirement (reported by Bjoern Gruening). Upgrade BWA dependency to v. 0.7.7 . Update Orione citation.
author crs4
date Fri, 18 Jul 2014 09:19:43 -0400
parents ccadfae70b02
children
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1:ccadfae70b02 2:208ce57f9221
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="bwa" version="0.6.2"> 3 <package name="bwa" version="0.7.7">
4 <repository changeset_revision="0778635a84ba" name="package_bwa_0_6_2" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="def70e393020" name="package_bwa_0_7_7" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="blat" version="35"> 6 <package name="blat" version="35x1">
7 <repository changeset_revision="cc0f4b49b6f1" name="package_blat_35x1" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="cc0f4b49b6f1" name="package_blat_35x1" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="sequel" version="1.0.2"> 9 <package name="sequel" version="1.0.2">
10 <install version="1.0"> 10 <install version="1.0">
11 <actions> 11 <actions>