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comparison repeatmodeler.xml @ 4:a9fb165808c8 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/repeatmodeler commit 612f328fa0ea6353ca75bf228fb9edc7e4635b70
author iuc
date Thu, 20 Apr 2023 08:49:13 +0000
parents 41bfbaf3c959
children 8661b2607b7e
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3:1e10310ce195 4:a9fb165808c8
14 ## "RMBlast jobs will use 4 cores each" 14 ## "RMBlast jobs will use 4 cores each"
15 pa=\$(( (\${GALAXY_SLOTS:-1}+3)/4 )) 15 pa=\$(( (\${GALAXY_SLOTS:-1}+3)/4 ))
16 16
17 && 17 &&
18 18
19 RepeatModeler -database 'rmdb' -pa \$pa 19 RepeatModeler -database 'rmdb' -threads \$pa
20 ]]></command> 20 ]]></command>
21 <inputs> 21 <inputs>
22 <param type="data" name="input_file" format="fasta" label="Input genome fasta"/> 22 <param type="data" name="input_file" format="fasta" label="Input genome fasta"/>
23 </inputs> 23 </inputs>
24 <outputs> 24 <outputs>