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comparison skesa.xml @ 7:15d00ca53144 draft

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Uploaded
author estrain
date Thu, 16 Aug 2018 13:39:03 -0400
parents f9b8095f18fe
children 2364f2fcec7d
comparison
equal deleted inserted replaced
6:f9b8095f18fe 7:15d00ca53144
11 --fasta $draft 11 --fasta $draft
12 #else if $jobtype.select == "se" 12 #else if $jobtype.select == "se"
13 --fastq $fastq1 13 --fastq $fastq1
14 #else if $jobtype.select == "pe" 14 #else if $jobtype.select == "pe"
15 --fastq $fastq1,$fastq2 --use_paired_ends 15 --fastq $fastq1,$fastq2 --use_paired_ends
16 #else if $jobtype.select == "pe" 16 #else if $jobtype.select == "rp"
17 --fastq $pairedfiles.forward,$pairedfiles.reverse --use_paired_ends 17 --fastq $pairedfiles.forward,$pairedfiles.reverse --use_paired_ends
18 #end if 18 #end if
19 #if $cores != 0 19 #if $cores != 0
20 --cores $cores 20 --cores $cores
21 #end if 21 #end if