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comparison skesa.xml @ 8:2364f2fcec7d draft

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Uploaded
author estrain
date Thu, 16 Aug 2018 13:51:38 -0400
parents 15d00ca53144
children 9e6af7620b3c
comparison
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7:15d00ca53144 8:2364f2fcec7d
48 </when> 48 </when>
49 <when value="cl"> 49 <when value="cl">
50 <param type="data_collection" name="collection_files" format="fastq" collection_type="list" label="FASTQS: Must be a Data Set list built from multiple fastq files" /> 50 <param type="data_collection" name="collection_files" format="fastq" collection_type="list" label="FASTQS: Must be a Data Set list built from multiple fastq files" />
51 </when> 51 </when>
52 <when value="rp"> 52 <when value="rp">
53 <param type="data_collection" name="pairedfiles" format="fastq" collection_type="paired" label="FASTQS: Must be a paired set of forward and reverse fastq files" /> 53 <param type="paired" name="pairedfiles" format="fastq" label="FASTQS: Must be a paired set of forward and reverse fastq files" />
54 </when> 54 </when>
55 </conditional> 55 </conditional>
56 <param name="memory" type="integer" label="Memory available (GB) [integer]" value="16" /> 56 <param name="memory" type="integer" label="Memory available (GB) [integer]" value="16" />
57 <param name="cores" type="integer" label="Number of cores to use (default all) [integer]" value="0" /> 57 <param name="cores" type="integer" label="Number of cores to use (default all) [integer]" value="0" />
58 <param name="kmer" type="integer" label="Minimal kmer length for assembly [default 21] if non are specified " value="0" /> 58 <param name="kmer" type="integer" label="Minimal kmer length for assembly [default 21] if non are specified " value="0" />